Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4 197 3e-45
seq6 140 6e-28
>seq4
Length=4310093
Score = 197 bits (218), Expect = 3e-45
Identities = 1010/1584 (64%), Gaps = 61/1584 (4%)
Strand=Plus/Minus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA- 243932
|| ||| | ||| ||| |||||||| ||||| |||| || || ||||| || ||
Sbjct 3512325 GATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGAT 3512266
Query 243933 -GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAAC 243991
| || || ||| || || || |||||||| | | ||||| || | ||||
Sbjct 3512265 AGTTCGTTGGCTGATTTCCCAGACA--GTCTTGTACAGTGCCTTGATGTCGGCAGGGATG 3512208
Query 243992 CCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051
||||||||| ||||| || || | |||||| || | ||||||||| |
Sbjct 3512207 TTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGAC 3512148
Query 244052 CACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110
|| || |||| | || |||| ||| | || | ||| || ||||| ||||| ||
Sbjct 3512147 CAGAGACCCAGATCGA-CCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACC 3512089
Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170
| ||| || || || ||||| |||| | ||||| | || || |||||||
Sbjct 3512088 AGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCC 3512029
Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230
|| ||||| | || ||| || ||||| || | || || ||| ||| | || ||
Sbjct 3512028 AAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACC 3511969
Query 244231 GTGCCTCTGGATG-CGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGC 244289
| | | ||| ||| | | | || ||||||||||| | | || ||
Sbjct 3511968 ATACTTGGCAATGTCGGCCT-TCAAAGAGTCCCAGTCCCACAGGTCAGATGGGG------ 3511916
Query 244290 GTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGG 244349
||| |||||||||| |||| |||| || | ||| |||||||||||||| |
Sbjct 3511915 ---TGACATTCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACG 3511859
Query 244350 TCGGGTAGGGACCGT-CGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAG 244408
|| || | || | | | || | | |||| || | ||| || || | ||||
Sbjct 3511858 TCTCATATGTGCCTTGCTCCCTTG-CAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAG 3511800
Query 244409 ATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG-GTGAAGGGGATGCC 244467
|||||||| |||||| |||| | | || |||| ||| || || || |||| | |
Sbjct 3511799 ATGGTCTCAAAGATCTGGATGTTGAGTTGTCGAGCCT--CCGGAGAGTCAAAGGGAAGAC 3511742
Query 244468 CATCATCATG-AAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCT 244526
| || | ||| | || || || || || || || | ||| || |||| || |||
Sbjct 3511741 GCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCA 3511682
Query 244527 TGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGT 244586
| || | | || || || ||||| || ||||| |||||| | ||||| | |
Sbjct 3511681 TATTACTCTTCTTCGCCTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAAT 3511622
Query 244587 TGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCT 244646
|||| |||| || | ||| || || | ||||| |||||| ||
Sbjct 3511621 TGCGTGTGACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATACTCG-------CCA 3511569
Query 244647 CGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCA 244706
|| ||| || || || || | ||||| | | |||| |||||||| || |
Sbjct 3511568 CGA-GAT--TGGTCG--ACGAAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGACAGCAA 3511514
Query 244707 CCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTG--ATGGT 244764
|||| || | ||| ||| ||| ||||||||||| || || || ||| |||||
Sbjct 3511513 CCTCGTCTGGCGCAGTGAACTCGACGATCTCGGTGCAAAGATT--TGAGCTTCGAATGGT 3511456
Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824
||||| || || || ||| ||| ||||||||| ||||||||||||||| ||||
Sbjct 3511455 GCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGT 3511396
Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCC 244883
||||||||| ||| || | || | ||| | ||| || | | |||||||| |||
Sbjct 3511395 ACCGGTCTCGGTCTGAGCCTCAAGAATCGCA-TACCACAGCTTCTGGGCCTTGACGGTCT 3511337
Query 244884 TGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGA 244943
|| | |||||| || || | ||| || ||| ||||| ||| |||
Sbjct 3511336 GACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGA 3511277
Query 244944 CCTCGTCTAGGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTG 245002
| || | || || || || | | ||||| | ||| |||| || | | || |
Sbjct 3511276 CATCAGCCAGTCCTGGTGCTTCATGA-GGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCG 3511218
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
|| | || |||||| | ||| ||| |||| | || | ||| ||||| | || |
Sbjct 3511217 ACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACT 3511158
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| ||| ||| |||||| || || | ||| ||||||||||| || ||||||| |||
Sbjct 3511157 TCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGC 3511098
Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG 245182
|||| ||||| || | || || || ||||||||||| |||||||| | | | ||
Sbjct 3511097 TCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGA----CGTAGCG 3511042
Query 245183 AGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238
|| |||||| | |||| |||| | | || || || || || || ||
Sbjct 3511041 GGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCC 3510982
Query 245239 CTTGATGTAGGCGCC-CTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCG 245293
||||||| ||| |||| | || ||| | ||| ||| || | || ||
Sbjct 3510981 TGCAATGTAGGAGCCAGTTGCAC----GGATGCAG-TGGGCATTGAGACCGATGCCACCA 3510927
Query 245294 GCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCC 245353
||| ||||||||| | ||| ||| |||||| ||||| |||||||| ||||| ||
Sbjct 3510926 GCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCA 3510867
Query 245354 GACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAAC 245413
|||||||| || || |||||||||||||||||||||| || | | | |||||
Sbjct 3510866 TCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAG 3510807
Query 245414 AGAGTGGGGCTGGCGTGGGTAAAG 245437
|| ||||| || || ||||||
Sbjct 3510806 AGCGTGGGTGACGCATGAGTAAAG 3510783
>seq6
Length=3486194
Score = 140 bits (154), Expect = 6e-28
Identities = 345/518 (67%), Gaps = 14/518 (3%)
Strand=Plus/Plus
Query 42511 GCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGC 42570
|||||| | ||||||| | || |||||| | ||||| ||| |||| | ||| |
Sbjct 2268359 GCTTCT-CAGCTTCCAAGTTATGATGGAGAACATCCACTCCGAGATGTATTC---ACTCC 2268414
Query 42571 TCA---ACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGA 42627
||| |||| ||| | |||||| ||| | | |||||| | || || || |
Sbjct 2268415 TCATCGACACATACGTGAGCGATCCCAAAGAGAAGACCTACCTGTTCGATGCTATCGACA 2268474
Query 42628 CGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG 42687
| || || |||||| |||||||| |||||||| || | |||||| | ||
Sbjct 2268475 CCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTCTTAGATGGATCTCTGATAAGGAGT 2268534
Query 42688 CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCG 42747
| || |||| | | ||||| || || | ||||||||||| |||||||| || ||
Sbjct 2268535 CCACTTTCGCTCAACGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGAT 2268594
Query 42748 CCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGA 42807
| || || | || |||||||||||| |||| |||||| || |||||||| || |
Sbjct 2268595 CATTTGCTGCGATTTTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAA 2268654
Query 42808 ACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGA 42867
| ||||||||| | || ||||| |||| | || ||||| ||||||| || |
Sbjct 2268655 ATGAACTCATCTCTCGTGATGAGGGCATGCACACAGATTTTGCATGCCTCC---TCCTGC 2268711
Query 42868 GCCACCTCAGGCACAAGCCC--TCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGT 42925
|| |||| |||||||||| | || ||| | | |||||| || || ||
Sbjct 2268712 AACATCTCAAGCACAAGCCCGACCCAA--AGCTCATTGAGAATGTCATCATCGAAGCAGT 2268769
Query 42926 GGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCA 42985
| || || || ||||| || || | |||| || || || | |||||||||
Sbjct 2268770 CGCTATTGAAAAAGAGTTTCTAACTGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAACTC 2268829
Query 42986 CGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023
| | ||||||||| ||||||| ||| ||||||||||
Sbjct 2268830 CAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACC 2268867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339046544880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |