Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 251 9e-62 seq6 109 7e-19 >seq4 Length=4310093 Score = 251 bits (278), Expect = 9e-62 Identities = 1174/1841 (64%), Gaps = 41/1841 (2%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||||||| | |||| | | |||||||||||||| || || ||||| | Sbjct 3512446 TGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3512387 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 || |||||| | | ||||| || | | ||| | || || || || | Sbjct 3512386 CCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCATGGTGGGTTCTTTCAAGT 3512327 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||||| |||||| || ||||||||| || ||||| |||||||| | | | Sbjct 3512326 GGATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGA 3512267 Query 113745 CA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 | | | | || ||||||||| ||||| |||| || ||| || || | ||||| Sbjct 3512266 TAGTTCGTTGGCT-GATTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATG 3512208 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | ||| || || | || ||||| | || || | | |||||| | | |||| Sbjct 3512207 TTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGAC 3512148 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 113923 |||||||| | | ||||||| || ||| | ||||| || |||||||| Sbjct 3512147 CAGAGACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACCA 3512088 Query 113924 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 113983 || ||| || | ||||| |||| || |||||||||||||| || ||||| || Sbjct 3512087 GCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCA 3512028 Query 113984 AAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 114043 | || |||| ||| || || || ||||| || || | ||| || ||| || | ||| Sbjct 3512027 AGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCA 3511968 Query 114044 TTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCT 114101 | | |||| |||| | | ||||||||| | | | || | | | | Sbjct 3511967 TACTTGGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGTCAGATGGGGTGACA--T 3511910 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 |||||| ||| ||||||| || ||||| ||| |||| ||||| | ||||| |||| Sbjct 3511909 TCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATG 3511850 Query 114162 GGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAA 114221 ||| | || || | ||| | || ||| || || || || || ||||||| Sbjct 3511849 TGCCTTGCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAA 3511790 Query 114222 AAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AAT 114279 | || | || | ||| | | |||| || ||||| | || || || | || Sbjct 3511789 AGATCTGGATGTTGAGTTGTCGAG-CCTCCGGAGAGTCAAAGGGAAGACG-CAGAGCAAG 3511732 Query 114280 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 114339 || |||| || |||||||| || || |||||||| || ||||| | ||||||| ||| Sbjct 3511731 GAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTT 3511672 Query 114340 TCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 114396 || ||| |||||||| | || | ||||| | | || | ||| || Sbjct 3511671 CTTCGC---CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGT 3511615 Query 114397 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 114456 ||| || | |||| |||||||| || | ||| | || | || | ||| Sbjct 3511614 GACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGAC 3511555 Query 114457 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 114516 | | |||||||| | || |||| ||| || |||| ||| || ||||| | Sbjct 3511554 GAAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAA 3511495 Query 114517 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 114576 ||| | || || || || | |||||| || |||||||||||||||||| || || Sbjct 3511494 CTCGACGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCT 3511435 Query 114577 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 114636 ||| |||| || ||||||||||| |||||||| || || || ||||| || || | || Sbjct 3511434 CTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTC 3511375 Query 114637 GAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTCCTC 114693 ||||| || | ||| | | || | | || | || | || || | | || ||||||| Sbjct 3511374 AAGAATCGCATACCACAGCTTCTGGGCCTTG-ACGGTCTGACG--GCCACGGCCCTCCTT 3511318 Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 114753 || || | |||||| | | |||||| || || | | || | || |||||||| Sbjct 3511317 TTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGC 3511258 Query 114754 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTC 114813 | || |||||||| |||| ||||| || ||| ||||||| |||||| | ||| Sbjct 3511257 TTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTC 3511198 Query 114814 TGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 114873 ||| |||| | ||| |||| || || || || ||||||| | || || || Sbjct 3511197 AGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTT 3511138 Query 114874 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 114933 | | | ||| ||||| | || ||| |||||||| || |||||||| | || | | Sbjct 3511137 TCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGC 3511078 Query 114934 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 || | | || || |||||| || || | || || || || || || Sbjct 3511077 ACC---AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACG 3511021 Query 114988 AAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTG 115045 | ||| ||||||| |||| ||| ||||| || || || || ||| | | | Sbjct 3511020 CAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCC--AGTT 3510963 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 || | || ||| | | ||| || || || || ||| ||||| || || Sbjct 3510962 GCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAG 3510903 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165 | |||| || | ||||| || ||||| ||| |||| | |||| | ||||||| Sbjct 3510902 GTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAG 3510843 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA- 115224 |||| || ||| |||||| || || |||||||| || |||| ||| || | || Sbjct 3510842 GAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAG 3510783 Query 115225 CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAAT 115284 || | |||||||| | ||| ||||| | | ||| || || ||||| || Sbjct 3510782 CACTTC-TGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGAT 3510724 Query 115285 ACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGC 115342 ||| | | || ||||||| ||||| || ||| ||| | | | | | ||| Sbjct 3510723 ACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGC--CGATT 3510666 Query 115343 CTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 || | ||||| ||||||||| ||||||| |||||| || Sbjct 3510665 TTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTA 3510625 >seq6 Length=3486194 Score = 109 bits (120), Expect = 7e-19 Identities = 211/310 (68%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| ||| ||| | ||||| ||||| |||||||||||||| || ||| || || Sbjct 2268697 GCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCA 2268638 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || ||| |||| | ||||||||||||| |||||| || || |||||||| Sbjct 2268637 GGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATA 2268578 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA--- 126223 ||||| || ||||| |||| || || | ||| || | | |||| | ||| Sbjct 2268577 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTG---GACTCCTTATCAGAG 2268521 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| | | ||||| | ||||| || ||| || |||| ||| | ||| || || Sbjct 2268520 ATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCG 2268461 Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 || || | |||| ||| ||||| | | ||| | || ||||| |||||| | Sbjct 2268460 AACAGGTAGGTCTTCTCTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATC 2268401 Query 126344 TCGCCGTGGA 126353 ||| ||||| Sbjct 2268400 TCGGAGTGGA 2268391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353502930040