Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 7e-24
seq3 89.7 5e-13
>seq5
Length=3889323
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| |||||||| || ||||| || | | |||||| |||||
Sbjct 1366559 AGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCT 1366500
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||| || ||| | ||||| || ||||| ||||||||||| || || || |||
Sbjct 1366499 TCAAGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCT 1366440
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||| | | || || || | || | ||||
Sbjct 1366439 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGTC 1366380
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | ||| || ||||| ||||||||
Sbjct 1366379 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| || || ||||| | || ||||| || || |||||||| ||||
Sbjct 1366803 ACCACCACGAAGTCTGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGA 1366744
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || || |||| ||||||||||||||||| | || | |||||||||||||| ||
Sbjct 1366743 GAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGG 1366684
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || ||||| ||||| ||| || || | |||||| || || ||
Sbjct 1366683 GATACCCTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGAC 1366624
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || | |||||||| || | || || ||||| ||||||||
Sbjct 1366623 CTCTAGCGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 1366576
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| |||| ||| ||||| || || | || || || ||||||||||| || |
Sbjct 1367031 ACCGCCACGCAGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGA 1366972
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || |||||||||||||||||||||| | || | | |||||||||||| ||
Sbjct 1366971 CAGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGG 1366912
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || | || ||
Sbjct 1366911 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTCTCAAC 1366852
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | ||||||||||||||| || || ||||| || |||||
Sbjct 1366851 TTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || ||||||||||| | |||||| | || || ||||| || ||
Sbjct 1366316 GTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACCA 1366257
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | ||||| |||||||| || |||||||| ||||| || || || || || |||
Sbjct 1366256 GCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTG 1366197
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | | || || || | || | ||||||||||| | ||
Sbjct 1366196 ACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTC 1366137
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 1366136 TTGACGAAGATCTGCAT 1366120
>seq3
Length=4945454
Score = 89.7 bits (98), Expect = 5e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | || || || || ||||| ||||| || || || ||| |||| || |
Sbjct 2827483 ACCGCCCCGGAGACTGAGGACCAGGTGAATGGTCGACTCCTTCTGGATGCTGTAGTCCGA 2827542
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| ||||| | || ||||||||||| | || || || |||||||||| |||
Sbjct 2827543 AAGGGTGCGTCCGTCTGCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGCAGG 2827602
Query 64336 AATTCCTTCTTT 64347
||||| ||| ||
Sbjct 2827603 AATTCTTTCCTT 2827614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644718807720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |