Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4 217 1e-51
>seq4
Length=4310093
Score = 217 bits (240), Expect = 1e-51
Identities = 624/947 (66%), Gaps = 12/947 (1%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT-GGATGG 93773
|| ||| | ||||||| ||||| || |||||||||| ||||| || || || || |
Sbjct 3510616 AACTACCAATACTTTGGTTTCAAGACGTTGGAGAAGTCATACCTGCTGAAAATCGGCAAG 3510675
Query 93774 CAGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCA 93833
|| | | |||| ||||| || || || | ||||| || || | || || ||||| |
Sbjct 3510676 CAAG-TCGCCGAACGACCACAGCACATGATTATGCGTGTGGCTGTTGGTATCCACGGTGA 3510734
Query 93834 CGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATG- 93891
||| || ||| | | | | || ||| | ||| | | ||| ||||
Sbjct 3510735 CGATATTGAGAAGACCATTGAGACATACAACCTTATGTCCCAGAAGTGCTTTACTCATGC 3510794
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
| ||||| || || ||||| || || || || ||| ||| |||| || || ||| ||
Sbjct 3510795 GTCACCC--ACGCTCTTCAATGCCGGAACACCACAGCCCCAGCTGTCCTCCTGCTTCTTG 3510852
Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
|| ||| | |||| || |||| || || | |||| |||||| |||||| |
Sbjct 3510853 ATCGAC-ATGAAGGATGATAGCATCGAGGGCATCTATGACACACTCAAGACCTGTGCCAT 3510911
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070
||||| || ||| || || ||||| ||| || |||| | | ||||| | || ||
Sbjct 3510912 GATCTCCAAGACCGCTGGTGGCATCGGTCTCAATGCCCACTGCATCCGTGCAACTGGCTC 3510971
Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130
|||||| || || ||||| || || || || ||| | |||||| | || || |||||
Sbjct 3510972 CTACATTGCAGGAACTAATGGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAA 3511031
Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190
||| |||| |||||||| |||||||| || | | | ||| |||| || ||||
Sbjct 3511032 CAATACGGCCCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTA 3511091
Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250
|| ||||| |||||||| || || | ||| | | || ||||||||||||||||
Sbjct 3511092 CCTGGAGCCATGGCACGCTGATGTCTTTGACTTCTTGAATCTAAGAAAGAACCACGGCAA 3511151
Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
|| | | ||| | ||||| ||||| ||| | ||| || ||| | || ||| |
Sbjct 3511152 GGAAGAAGTCCGTGCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGA 3511211
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370
|| |||||||| ||| | |||| |||||| || || ||||| || |||||| |
Sbjct 3511212 GCGTGTCGAGAAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGC 3511271
Query 94371 CGACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428
|| || | | ||| | | ||| | || | || | | || ||| | |||||
Sbjct 3511272 TGATGTCTACGGCGAT-GAG-TTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGT 3511329
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
| | | || | | || |||||||||| || ||| | || | ||| |||
Sbjct 3511330 GGCCGTCAGACCGTCAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACCGAG 3511389
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
|| ||||| |||||||| | | |||||| | |||| ||| ||||||| || ||
Sbjct 3511390 ACCGGTACTCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAAC 3511449
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
| || || ||||| ||||| ||||||||||| ||||||| ||| | || |||
Sbjct 3511450 TTGGGCACCATTCGAAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGAC 3511509
Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT 94655
||| ||||||| || || ||| ||| | ||| |||| |||||
Sbjct 3511510 GAGGTTGCTGTCTGCAATTTGGCTTCCCTGGCCCTTCCCACCTTCGT 3511556
Score = 104 bits (114), Expect = 2e-17
Identities = 284/432 (66%), Gaps = 10/432 (2%)
Strand=Plus/Plus
Query 94992 ACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA 95051
||| ||||| | |||| ||| | ||| ||| | || || | |||| ||||||||
Sbjct 3511881 ACAAGGCATGCTCCAGTATGACATGTGGAATGTCACCCCATCTGACCTGTGGGACTGGGA 3511940
Query 95052 AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCAT 95111
|| | || || || ||| | ||||| ||| | || || || || || ||
Sbjct 3511941 CTCTTTGAAGGCCGACATTGCCAAGTATGGTGTTCGCAACTCTCTCCTCGTTGCTCCTAT 3512000
Query 95112 GCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTC 95171
||| || || || || | ||||| |||||||||||||| | || || || | || ||
Sbjct 3512001 GCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTTGAGCCATATACTTC 3512060
Query 95172 CAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT 95231
|||| | ||| | | || || || || || || |||| ||| ||||| | ||| |
Sbjct 3512061 CAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCAACCCGTGGCTCTT 3512120
Query 95232 ACGGGACCTGACGTC--TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC 95289
||| ||| ||| ||||||| | ||| || || | ||||||| | | |
Sbjct 3512121 GAAGGATCTG--GTCGATCTGGGTCTCTGGTCAGATAACATGAAGAACCGTATCAT---C 3512175
Query 95290 GCCAAC---GGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTAC 95346
||| || || || || ||||||||||| | || || | ||||||||||| || |||
Sbjct 3512176 GCCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAGGCACTGTAC 3512235
Query 95347 AAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCC 95406
||||| || ||||| ||| || || || ||| | ||||||| || || ||
Sbjct 3512236 AAGACTGTCTGGGAAATCAGCCAACGAACTATCCTCCAGATGGCGGCCGATCGGGGCGCC 3512295
Query 95407 TTCATCTGCCAG 95418
|||||| ||||
Sbjct 3512296 TTCATCGACCAG 3512307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723119607480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |