Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 217 1e-51 >seq4 Length=4310093 Score = 217 bits (240), Expect = 1e-51 Identities = 624/947 (66%), Gaps = 12/947 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT-GGATGG 93773 || ||| | ||||||| ||||| || |||||||||| ||||| || || || || | Sbjct 3510616 AACTACCAATACTTTGGTTTCAAGACGTTGGAGAAGTCATACCTGCTGAAAATCGGCAAG 3510675 Query 93774 CAGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCA 93833 || | | |||| ||||| || || || | ||||| || || | || || ||||| | Sbjct 3510676 CAAG-TCGCCGAACGACCACAGCACATGATTATGCGTGTGGCTGTTGGTATCCACGGTGA 3510734 Query 93834 CGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATG- 93891 ||| || ||| | | | | || ||| | ||| | | ||| |||| Sbjct 3510735 CGATATTGAGAAGACCATTGAGACATACAACCTTATGTCCCAGAAGTGCTTTACTCATGC 3510794 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 | ||||| || || ||||| || || || || ||| ||| |||| || || ||| || Sbjct 3510795 GTCACCC--ACGCTCTTCAATGCCGGAACACCACAGCCCCAGCTGTCCTCCTGCTTCTTG 3510852 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 || ||| | |||| || |||| || || | |||| |||||| |||||| | Sbjct 3510853 ATCGAC-ATGAAGGATGATAGCATCGAGGGCATCTATGACACACTCAAGACCTGTGCCAT 3510911 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || ||| || || ||||| ||| || |||| | | ||||| | || || Sbjct 3510912 GATCTCCAAGACCGCTGGTGGCATCGGTCTCAATGCCCACTGCATCCGTGCAACTGGCTC 3510971 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| || || ||||| || || || || ||| | |||||| | || || ||||| Sbjct 3510972 CTACATTGCAGGAACTAATGGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAA 3511031 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 ||| |||| |||||||| |||||||| || | | | ||| |||| || |||| Sbjct 3511032 CAATACGGCCCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTA 3511091 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 || ||||| |||||||| || || | ||| | | || |||||||||||||||| Sbjct 3511092 CCTGGAGCCATGGCACGCTGATGTCTTTGACTTCTTGAATCTAAGAAAGAACCACGGCAA 3511151 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | | ||| | ||||| ||||| ||| | ||| || ||| | || ||| | Sbjct 3511152 GGAAGAAGTCCGTGCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGA 3511211 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || |||||||| ||| | |||| |||||| || || ||||| || |||||| | Sbjct 3511212 GCGTGTCGAGAAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGC 3511271 Query 94371 CGACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428 || || | | ||| | | ||| | || | || | | || ||| | ||||| Sbjct 3511272 TGATGTCTACGGCGAT-GAG-TTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGT 3511329 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | | || | | || |||||||||| || ||| | || | ||| ||| Sbjct 3511330 GGCCGTCAGACCGTCAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACCGAG 3511389 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 || ||||| |||||||| | | |||||| | |||| ||| ||||||| || || Sbjct 3511390 ACCGGTACTCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAAC 3511449 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 | || || ||||| ||||| ||||||||||| ||||||| ||| | || ||| Sbjct 3511450 TTGGGCACCATTCGAAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGAC 3511509 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT 94655 ||| ||||||| || || ||| ||| | ||| |||| ||||| Sbjct 3511510 GAGGTTGCTGTCTGCAATTTGGCTTCCCTGGCCCTTCCCACCTTCGT 3511556 Score = 104 bits (114), Expect = 2e-17 Identities = 284/432 (66%), Gaps = 10/432 (2%) Strand=Plus/Plus Query 94992 ACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA 95051 ||| ||||| | |||| ||| | ||| ||| | || || | |||| |||||||| Sbjct 3511881 ACAAGGCATGCTCCAGTATGACATGTGGAATGTCACCCCATCTGACCTGTGGGACTGGGA 3511940 Query 95052 AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCAT 95111 || | || || || ||| | ||||| ||| | || || || || || || Sbjct 3511941 CTCTTTGAAGGCCGACATTGCCAAGTATGGTGTTCGCAACTCTCTCCTCGTTGCTCCTAT 3512000 Query 95112 GCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTC 95171 ||| || || || || | ||||| |||||||||||||| | || || || | || || Sbjct 3512001 GCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTTGAGCCATATACTTC 3512060 Query 95172 CAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT 95231 |||| | ||| | | || || || || || || |||| ||| ||||| | ||| | Sbjct 3512061 CAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCAACCCGTGGCTCTT 3512120 Query 95232 ACGGGACCTGACGTC--TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC 95289 ||| ||| ||| ||||||| | ||| || || | ||||||| | | | Sbjct 3512121 GAAGGATCTG--GTCGATCTGGGTCTCTGGTCAGATAACATGAAGAACCGTATCAT---C 3512175 Query 95290 GCCAAC---GGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTAC 95346 ||| || || || || ||||||||||| | || || | ||||||||||| || ||| Sbjct 3512176 GCCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAGGCACTGTAC 3512235 Query 95347 AAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCC 95406 ||||| || ||||| ||| || || || ||| | ||||||| || || || Sbjct 3512236 AAGACTGTCTGGGAAATCAGCCAACGAACTATCCTCCAGATGGCGGCCGATCGGGGCGCC 3512295 Query 95407 TTCATCTGCCAG 95418 |||||| |||| Sbjct 3512296 TTCATCGACCAG 3512307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723119607480