Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 152 5e-32 seq6 84.2 2e-11 seq1 82.4 8e-11 >seq4 Length=4310093 Score = 152 bits (168), Expect = 5e-32 Identities = 950/1510 (63%), Gaps = 33/1510 (2%) Strand=Plus/Minus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || ||||||| || || ||||| || |||| || || | | || | ||| ||| Sbjct 3512113 ACGGGTTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTAT 3512054 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || |||||| ||||||| ||||| || || || | || | ||||| ||||| | Sbjct 3512053 ATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAG 3511994 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 | || | | ||| || || | || | | ||||||| ||||||| | | ||| | Sbjct 3511993 CAACGAGGAGAGAGTTGCGAACACCATACTTGGCAATGTCGGCCTTCAAAGAGTCCCAGT 3511934 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||||| | || || || | ||||||||||| ||||| | || ||| | | | | Sbjct 3511933 CCCACAGGTCAGATGGGGTGACATTCCACATGTCATACTGGAGCATGCCTTGTGAGACTG 3511874 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCG 153323 | ||||| | |||| || |||| | | | | | | || ||||| ||| | Sbjct 3511873 GGCTGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTTG-CAAGCTCGCACGAAGCAGTG 3511815 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383 || || ||| ||| ||||| || ||| || | ||||| | || || || Sbjct 3511814 AGAGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGTT--GTCGAGCCTCCGGAG 3511757 Query 153384 --TCGTACGGCATGCGCAGCAGCACA-AAGGCGTCGGCCAGACCCTGGATACCGACGCCG 153440 || | || | ||||| |||| ||||| || || ||||| || | || | ||| Sbjct 3511756 AGTCAAAGGGAAGACGCAG-AGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCCA 3511698 Query 153441 ATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATTGCGATC 153499 || |||||||| | || || | |||| ||| | | |||||||| ||| || Sbjct 3511697 ATAGGTCGATGGCGCATATTACTCTTCTTCGC-CTCAGGGACGGGATAGTAGTTGATGTC 3511639 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 ||| |||||||| | ||||| ||||||| ||| | | | | ||| |||| || Sbjct 3511638 GATGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAGGCGACCGAAGTC 3511579 Query 153560 ATAG--GTCAT----TTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATT 153613 ||| | || || ||||||| | | || | ||| | || |||| ||| Sbjct 3511578 ATACTCGCCACGAGATTGGTCGACG---AAGGTGGGA---AGGGCCAGGGAAGCCAAATT 3511525 Query 153614 ACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGC 153672 ||||| || ||| || |||| | || ||| |||||||||| ||| || || || Sbjct 3511524 GCAGACAGCAACCTCGTCTGGCGCAG-TGAACTCGACGATCTCGGTGCAAAGATTTGAGC 3511466 Query 153673 ATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCA 153732 | ||| |||||| || | ||| ||||| || | ||||| || || ||| |||||| Sbjct 3511465 TTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCA 3511406 Query 153733 TGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCG 153789 |||| || ||||||||| || | || | || | ||| ||| | ||| | Sbjct 3511405 TGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCA---CAGCTTCTGGG 3511349 Query 153790 CTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACT 153849 | || ||| || |||||||| | || |||| |||||| || || ||||| Sbjct 3511348 CCTTGACGGTCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACT 3511289 Query 153850 CGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATAT 153909 | ||||||||| || || || || || | ||| || || | || | ||| | Sbjct 3511288 CATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGAGTCCATTCCT 3511229 Query 153910 CGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGC 153969 || | ||| || |||||||| || || ||| | || || | ||||| | Sbjct 3511228 GGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCAC 3511169 Query 153970 GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGG 154029 | || | || ||| ||| ||| | | ||||| | | | | ||| || | Sbjct 3511168 GGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAG 3511109 Query 154030 CGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGA 154086 ||||||| || || | ||||| ||| | ||||| ||||| |||||||| |||| Sbjct 3511108 CGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGA 3511049 Query 154087 CGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGT 154146 ||| ||| || |||||||||| || |||| ||| || || || ||| || || | Sbjct 3511048 CGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCAT 3510989 Query 154147 TGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGC 154206 | || || | | ||| || || | || | || | || ||||| | Sbjct 3510988 TAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAGACCGATGCCAC 3510929 Query 154207 CGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTAT 154266 | || ||| || || || ||| || || |||||||| |||||||||| Sbjct 3510928 CAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTAT 3510869 Query 154267 CGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAA 154326 | || | | ||| |||||| || || ||| || || | ||||| || | Sbjct 3510868 CATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGA 3510809 Query 154327 AGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGG 154386 |||| ||||| ||| || ||||| || ||| ||| | | ||| || || |||| Sbjct 3510808 AGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGG 3510749 Query 154387 CGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGAC 154446 | || ||||| || ||||| || || | || || ||||| | ||||||||| || | Sbjct 3510748 TCTTCTCAATATCGTCACCGTGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTC 3510689 Query 154447 GTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGA 154506 ||||||||||| ||| | || |||| || ||| || || | || ||| |||| | Sbjct 3510688 GTTCGGCGACTTGCTTGCCGATTTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAA 3510629 Query 154507 AATACTTGTA 154516 | || | ||| Sbjct 3510628 AGTATTGGTA 3510619 >seq6 Length=3486194 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 52600 TGAGCATGT--TCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCC 52657 |||| |||| ||| || || || ||||| ||||| |||||| | || | ||||| || Sbjct 2268746 TGAGAATGTCATCATCGAAGCAGTCGCTATTGAAAAAGAGTTTCTAACTGAAGCGCTCCC 2268805 Query 52658 GGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGA 52717 |||| |||||||||||||| | || ||||||| ||||||| |||||||| || || Sbjct 2268806 TGTCGGTTTGCTGGGCATGAACTCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGA 2268865 Query 52718 TCG 52720 || Sbjct 2268866 CCG 2268868 >seq1 Length=6061779 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| || ||||||||||||| ||||| ||| |||||||| || |||| ||| Sbjct 4126219 CCTTTTGGATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 4126278 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || ||||| ||||| || || || || || ||||| ||| || ||| | |||| Sbjct 4126279 TCAGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTG- 4126337 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||| | || || ||||||| || | || || || || || || || || Sbjct 4126338 TCGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 4126397 Query 138604 AA 138605 || Sbjct 4126398 AA 4126399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262319357360