Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 262 5e-65 seq6 118 1e-21 >seq4 Length=4310093 Score = 262 bits (290), Expect = 5e-65 Identities = 1179/1839 (64%), Gaps = 37/1839 (2%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||||||||||| | |||| | | |||||||||||||| || || ||||| | Sbjct 3512446 TGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3512387 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 || |||||| | | ||||| || | | ||| | || || || || | Sbjct 3512386 CCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCATGGTGGGTTCTTTCAAGT 3512327 Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705 || ||||| |||||| || ||||||||| |||||||| |||||||| | | | Sbjct 3512326 GGATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGA 3512267 Query 115706 CA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 | | | | || ||||||||| ||||| |||| || ||| || || | ||||| Sbjct 3512266 TAGTTCGTTGGCT-GATTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATG 3512208 Query 115765 TCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGAC 115824 | ||| || || | || ||||| | || || | | |||||| | | |||| Sbjct 3512207 TTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGAC 3512148 Query 115825 CAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCC 115884 |||||||| | | ||||||| || ||| | ||||| || |||||||| Sbjct 3512147 CAGAGACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACCA 3512088 Query 115885 GCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 115944 || ||| || | |||||||||| || |||||||||||||| || ||||| || Sbjct 3512087 GCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCA 3512028 Query 115945 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCC 116004 | || |||| || || || || ||||| || || | ||| || |||||| | ||| Sbjct 3512027 AGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCA 3511968 Query 116005 ACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCT 116062 | |||| |||| | | ||||||||| | | | || | | | | Sbjct 3511967 TACTTGGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGTCAGATGGGGTGACA--T 3511910 Query 116063 CCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 116122 |||||| ||| ||||||| || ||||| || |||| ||||| | |||||||||| Sbjct 3511909 TCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATG 3511850 Query 116123 GGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAA 116182 ||| | || || | ||| | || ||| || || || || || ||||||| Sbjct 3511849 TGCCTTGCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAA 3511790 Query 116183 AAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA-AAT 116240 | || | || | ||| | | |||| || ||||| | ||||| || | || Sbjct 3511789 AGATCTGGATGTTGAGTTGTCGAG-CCTCCGGAGAGTCAAAGGGAAGACG-CAGAGCAAG 3511732 Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300 || |||| || |||||||| || || |||||||| || ||||| | ||||||| ||| Sbjct 3511731 GAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTT 3511672 Query 116301 TCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357 || ||| |||||||| | || | ||||| | | || | ||| || Sbjct 3511671 CTTCGC---CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGT 3511615 Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 116417 ||| || | |||| |||||||| || | ||| | || | || | ||| Sbjct 3511614 GACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGAC 3511555 Query 116418 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 116477 | | |||||||| | || |||| ||| || |||| ||| || ||||| | Sbjct 3511554 GAAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAA 3511495 Query 116478 CTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 116537 ||| | || || || || | |||||| || |||||||||||||||||| || || Sbjct 3511494 CTCGACGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCT 3511435 Query 116538 CTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTT 116597 ||| |||| || ||||||||||||||||| || || || || ||||| || || | || Sbjct 3511434 CTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTC 3511375 Query 116598 GAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTCCTC 116654 ||||| || | ||| | | || | | || | || | || || | | || ||||||| Sbjct 3511374 AAGAATCGCATACCACAGCTTCTGGGCCTTG-ACGGTCTGACG--GCCACGGCCCTCCTT 3511318 Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714 || || | |||||| ||| |||||| || || | || | || |||||||| Sbjct 3511317 TTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGC 3511258 Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774 | || || ||||| |||| ||||| || ||| || |||| |||||| | ||| Sbjct 3511257 TTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTC 3511198 Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834 ||| |||| | || |||| || || || || ||||||| | || || || Sbjct 3511197 AGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTT 3511138 Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG- 116893 | | | ||| ||||| | || ||| |||||||| || |||||||| | || | | Sbjct 3511137 TCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGC 3511078 Query 116894 ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAA 116950 ||| | || | | || |||||| || || | ||||| ||| || || || | Sbjct 3511077 ACCAGGTCGCTTGTTG-CCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCA 3511019 Query 116951 GCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGC 117008 ||| ||||||| |||| ||| ||||| || || || || ||| | ||| || Sbjct 3511018 ACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAG-CCAGTT-GC 3510961 Query 117009 TCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTC 117068 | || |||| | | ||| || || || || ||| ||||| || || Sbjct 3510960 ACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGT 3510901 Query 117069 CGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCT 117128 | |||| || | ||||| || ||||| ||| |||| | |||| | ||||||| Sbjct 3510900 CTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGA 3510841 Query 117129 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CA 117187 |||| || ||| |||||| || || |||||||| || |||| ||| || | || || Sbjct 3510840 GGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCA 3510781 Query 117188 TACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATAC 117247 | |||||||| | ||| ||||| | | ||| || || ||||| |||| Sbjct 3510780 CTTC-TGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATAC 3510722 Query 117248 CGATTGAGACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCT 117305 | | | || ||||||| ||||| || ||| ||| | | | | | ||| | Sbjct 3510721 CAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGC--CGATTTT 3510664 Query 117306 CTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 | | ||||| ||||||||| ||||||| |||||| || Sbjct 3510663 CAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTA 3510625 >seq6 Length=3486194 Score = 118 bits (130), Expect = 1e-21 Identities = 213/310 (69%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| ||| ||| | ||||| ||||| |||||||||||||| || ||| ||||| Sbjct 2268697 GCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCA 2268638 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || ||| |||| | ||||||||||||| |||||| ||||| |||||||| Sbjct 2268637 GGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATA 2268578 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA--- 127696 ||||| || ||||| |||| || || | || || | ||||| ||||| Sbjct 2268577 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAG---TGGACTCCTTATCAGAG 2268521 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| | | ||||| | ||||| || ||| || |||| ||| | ||| || || Sbjct 2268520 ATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCG 2268461 Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 || || | |||| ||| ||||| | | ||| | || ||||| |||||| | Sbjct 2268460 AACAGGTAGGTCTTCTCTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATC 2268401 Query 127817 TCGCCGTGGA 127826 ||| ||||| Sbjct 2268400 TCGGAGTGGA 2268391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507100305080