Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4 163 5e-35
>seq4
Length=4310093
Score = 163 bits (180), Expect = 5e-35
Identities = 485/731 (66%), Gaps = 19/731 (3%)
Strand=Plus/Minus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896
||||| || || ||||||||||||| | || | | || | | || |||||||||
Sbjct 3512459 TCTTGGTCGACAGTGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATG 3512400
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| || || || ||| | | ||| ||| | ||||||||| | | ||||| || | ||
Sbjct 3512399 CCAGTTTTGAGACCCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCATGGTG 3512340
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCC-GATCTGC 204015
|| || || ||| ||||||| || ||| ||||||||||| ||||||| |||| ||
Sbjct 3512339 GGTTCTTTCAAGTGGATGTTCAAGGATTGGGACTGGTCGATGAA-GGCGCCCCGATCGGC 3512281
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075
||||| | || || || || || ||||| || |||||| ||| | || |
Sbjct 3512280 CGCCATCTGGAGGATAGTTCGTTGGCTGATTTCCCAGACAGTCTTGTACAGTGCCTTGAT 3512221
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTGATC-GAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| ||| | | | | || |||| | || || |||||| || | | ||
Sbjct 3512220 GTCGGCAGGGATGT-TGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCT 3512162
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
|| | | || ||| | |||| || ||| ||| || || ||||||| ||
Sbjct 3512161 TCATGTTATCTGACCAGAGACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGA 3512102
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
||| || || || | ||| || | |||| | | | |||| || |||| || ||
Sbjct 3512101 CCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGC 3512042
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||||||| | |||||| | ||| || || ||||| ||||| | ||| || |
Sbjct 3512041 ATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAG 3511982
Query 204315 AGTTGCGCACACCGTATTTTTGGACCCTG-CG--CTTCAGAGAGGTCCAGTCGTGCATCG 204371
||||||| ||||| || || | | || || ||||| |||| |||||| ||
Sbjct 3511981 AGTTGCGAACACCATACTT---GGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGT 3511925
Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431
|| || | || ||||||||| |||| | |||||||| ||||||||||||||
Sbjct 3511924 CAGATGGGGTGACATTCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCT 3511865
Query 204432 TGTACGTCGGATAAG-GC--TGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGT 204488
||||||| ||| | || || ||| ||| || |||| |||||| || | | ||
Sbjct 3511864 CGTACGTCTCATATGTGCCTTGCTCC-CTT--GCAAGCTCGCACGAAGCAGTGAGAGCCG 3511808
Query 204489 GATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAAC 204547
|| ||| ||||||||||||||||| | ||| | | || || ||||||| ||||||
Sbjct 3511807 CATGGTAGATGGTCTCAAAGATCTGGATGTTGAGT-TGTCGAGCCTCCGGAGAGTCAAAG 3511749
Query 204548 GCCAGACCCAG 204558
| |||| |||
Sbjct 3511748 GGAAGACGCAG 3511738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155070787280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |