Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq6 165 8e-36
seq5 122 9e-23
seq1 105 7e-18
>seq6
Length=3486194
Score = 165 bits (182), Expect = 8e-36
Identities = 340/499 (68%), Gaps = 10/499 (2%)
Strand=Plus/Minus
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
|||| || |||||| || ||||| ||||| || ||||| | | | || | ||||||
Sbjct 2268874 AGCAACCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGAGTTCATGCCCAGC 2268815
Query 132781 AGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840
| || || || |||||||| || ||||| || || || ||||| || ||| ||| |
Sbjct 2268814 AAACCGACAGGGAGCGCTTCAGTTAGAAACTCTTTTTCAATAGCGACTGCTTCGATGATG 2268755
Query 132841 ATTTCCCTAACGCGCGCCGCGCTCGGCCGT-TGCACCAAATGCTTGAACATCAAGCAAGC 132899
| | | || | || | | |||| | | ||| | ||| | | | | ||| ||
Sbjct 2268754 ACATTCTCAATGAGCTTTGGG-TCGGGCTTGTGCTTGAGATGTTGCAGGAGGAGGCATGC 2268696
Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA--GTCAAGCCG 132957
||| || |||| |||||| || | || |||||||| || ||||| || | ||
Sbjct 2268695 AAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATT--TGAAAAGGTGAGACCA 2268638
Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017
||||| ||||| | |||||||| || || || || || || ||||||||||
Sbjct 2268637 GGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATA 2268578
Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077
||||||||||| |||||||| ||||| || | |||| |||| || || | ||||
Sbjct 2268577 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAGATC 2268518
Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137
|| | || ||||| |||||||| | || ||| || || || ||||| || | |||
Sbjct 2268517 CATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCGAAC 2268458
Query 133138 AAACGGAGTTTCTCTTCCGAGGAACG--CACGTAGGTGTCGATGAGGGTCGAATACATTT 133195
| | ||||||| ||| || |||||| |||||||||||| |||||||| |
Sbjct 2268457 AGGTAGGTCTTCTCTT--TGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATCT 2268400
Query 133196 CCGAGTGTACGTTCTCCAT 133214
| ||||| | |||||||||
Sbjct 2268399 CGGAGTGGATGTTCTCCAT 2268381
Score = 91.5 bits (100), Expect = 1e-13
Identities = 156/223 (70%), Gaps = 5/223 (2%)
Strand=Plus/Minus
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATT 133286
||||| || || ||||| || ||||||||||| | || ||||||||| | ||| ||
Sbjct 2268315 CCGTAGAAACAGCGCGCTTCAGGTACCTGCACTTC-GGCGCTGAAACGCTCCAGCAGGTT 2268257
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||| |||||||| || ||||| || || || || || || ||| | |||
Sbjct 2268256 CTCGTTGACAATGCCGTCTGAAGCAGCGAAGAAAGCAAGGACATGGGAGACGAAGTAGCG 2268197
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
|| | | ||||| || | ||| ||| || ||| || |||||||| || || ||
Sbjct 2268196 TTCATCATTGTTCAGTCGGTTGTGCCAATCGTGCAGGTCTTTCGACAGGTCGACTTCTTC 2268137
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCAC 133446
| |||||||| ||||| || ||||||||| |||||
Sbjct 2268136 TGCTGTCCAAAAGCTAGCCTCAGCACGTTTGTACATGTTCCAC 2268094
>seq5
Length=3889323
Score = 122 bits (134), Expect = 9e-23
Identities = 160/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || |||||| | || || ||| | | |
Sbjct 1366120 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTTGAGTCGAGC 1366179
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| || |||| ||||| || || ||||| | || |
Sbjct 1366180 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 1366237
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| || |||||||| || || | |||||||| | ||| ||||
Sbjct 1366238 AGCAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGATTACA 1366297
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| || || |||| ||||| ||||| || |||
Sbjct 1366298 ACATCCAGAAAGAGTCGACACTGCACTTGGTCCTCCGT 1366335
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||||||||| || ||||| | || ||||| || |
Sbjct 1366576 ATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACTATCACGCTAGAGGTCGAATCCTCG 1366635
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || ||||| | ||||| ||||| || || |||||||
Sbjct 1366636 GATACAATTGACAACG-TCAAGTCGAAAATTCAAGACAAGGAGGGTATCCCACCCGACCA 1366694
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| ||||| ||||| || |||| || || ||| ||||||||
Sbjct 1366695 GCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGAACGCTCTCAGACTACAA 1366754
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| |||||| | || || ||| | || ||
Sbjct 1366755 CATCCAGAAGGAATCCACCCTCCATCTCGTTCT 1366787
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||| || | || || ||| | |
Sbjct 1366804 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACATTGGAAGTTGAGAGCTCA 1366863
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| || || |||||||
Sbjct 1366864 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAG 1366923
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | | || | ||| ||||| ||||| || |||| || || || ||||||||||
Sbjct 1366924 CAGAGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGAACGCTGTCCGACTACAAC 1366983
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| || ||||| ||| || |||| |||||||| | || | |||||
Sbjct 1366984 ATTCAGAAGGAGAGC-ACTTTGCACCTGGTGCTGAGACTGCGTGGCGG 1367030
>seq1
Length=6061779
Score = 105 bits (116), Expect = 7e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| ||||| || | |||| |
Sbjct 4126399 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 4126340
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | ||| || |||| ||||| ||||| || || ||||||| ||||| ||
Sbjct 4126339 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCCGACCAGCAGCGACTG 4126280
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| || || || |||| || || | | ||||||||| |||||||||
Sbjct 4126279 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATCCAAAAG 4126220
Query 38433 G 38433
|
Sbjct 4126219 G 4126219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172718721920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |