Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq3 307 1e-78
seq5 194 2e-44
seq8 138 1e-27
seq4 91.5 2e-13
>seq3
Length=4945454
Score = 307 bits (340), Expect = 1e-78
Identities = 487/693 (70%), Gaps = 14/693 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || ||||| | |||||||| ||||||||
Sbjct 1301164 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTAGACTTGACTTCGAAGATACCC 1301223
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||| ||| | | | ||| ||||| || ||||| ||||| || || || ||||| ||
Sbjct 1301224 TCTTCGATGGTCAGGAGCGACACATCGAAGGTACCGCCACCGAGATCGAAGATGAGGACA 1301283
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || | ||||| |||||||| || || || || || || || || ||
Sbjct 1301284 TTGCGCTCACCCTCGGTCTTCTTGTCGAGACCATAGGCAATGGCGGCGGCAGTCGGCTCG 1301343
Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| || |||| || |||| || || || || || | || ||||| || ||||| ||
Sbjct 1301344 TTGATGATACGGAGGACA-TTGAGACCTGCGATCAAACCTGCGTCTTTTGTGGCTTGACG 1301402
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||| || ||||| ||||| || ||||| || ||||| |||| | || | ||||||
Sbjct 1301403 TTGGGAGTCGTTGAAGTATGCGGGGACAGTGACGACAGCGTTGTTAACGGTGCCACCGAG 1301462
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
|| || || ||| | ||| |||| || || |||||||| || || |||||||| | |
Sbjct 1301463 GTATGACTCAGCGGTCTCTCTCATCTTTGTGAGAACCATTGACGAGATCTCTTCGGGTGT 1301522
Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT--ATCCGCAG-CACC 7872
|| |||||| |||| || || || || |||||||| | ||| || ||| | || |
Sbjct 1301523 GAATTGTTTCTTTTCGCCTTTGAATTCGACTTCAATGACGGGCTTGCCTCCCTTGTCAAC 1301582
Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932
| ||||| | | | | ||||| ||| ||||||| | || | || ||
Sbjct 1301583 G------ACCTTGAAAGGAAAGTGCTTCATGTCGGCTTGGACTTCGGCATCAGCGAATTT 1301636
Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992
| ||||| || ||||| || || || |||||||| | || ||||| || ||| ||
Sbjct 1301637 CCGGCCGATCAGTCGCTTCGCGTCGAAGACTGTGTTCTGAGGATTCATAGCGACTTGATT 1301696
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| || || || || |||||||| || | | || ||||| ||||| | || |||||
Sbjct 1301697 CTTGGCGGCATCACCAATAAGACGCTC---AGTGTCGGTAAAGGCGACAAAGGAGGGGGT 1301753
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
||||| || ||||||||||| ||||| || || | |||||| | | | ||| ||| ||
Sbjct 1301754 GGTTCGGTTGCCTTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCGGAAGATGCCTAC 1301813
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || || || || |||| ||| ||||| ||
Sbjct 1301814 GCATGAGTAGGTAGTACCTAGATCGATACCTAT 1301846
Score = 145 bits (160), Expect = 1e-29
Identities = 559/871 (64%), Gaps = 23/871 (3%)
Strand=Plus/Plus
Query 6529 TTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTT---TCATCTTCATCTTTATA 6585
||| ||||||||||||||| || | ||| ||| ||||| ||| | || ||
Sbjct 1300166 TTCCAGACCATTCTTCGCCGAGA---TACGAGCGGACTCGGCCTCATCCTCAGCCTTGTA 1300222
Query 6586 CTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATT 6645
||| || || ||| | ||| || || ||||| || || | | ||||| || ||
Sbjct 1300223 CTTCTCGGCCTCTGACAGCATACGCTCGATATCTTCCTTGGACAGACGACCCTTGTCGTT 1300282
Query 6646 CGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAAT 6705
|| || |||||| | || || || | |||| || |||| || |||| ||
Sbjct 1300283 GGTGATGACAATCTTGTTCGACTTGCCGGTACCCTTCTCGACAGCGGACACGTTCATGAT 1300342
Query 6706 ACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGG 6765
|||||| ||||||| ||||||| | || | || || || ||| | || || | |||
Sbjct 1300343 ACCATTGGCATCAAGATCGAACGTGACCTCGATCTGAGGAACACCACGAGGAGCAGGTGG 1300402
Query 6766 AATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACC 6825
||| || | | || || | || || | |||| ||| | | ||| |||||
Sbjct 1300403 AATGCCGGAGAGCTCGAACTTGCCCAGCAGGTTGTTGTCCTTGGTACGAGCACGCTCACC 1300462
Query 6826 TTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTC 6885
||| ||||||| || ||| | ||||| || || || |||||| | |
Sbjct 1300463 TTCGTAGACTTGGATGAGCACACCTGGTTGGTTGTCGGAAAAGGTGGAGAAGGTCTCGGA 1300522
Query 6886 TTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGT 6945
||||| | ||||| || || || | | || | || ||||| | |||||| |||
Sbjct 1300523 CTTCTTGGTGGGAATGGTAGTGTTCCGCTTGATGAGAGGCGTCATGACACCACCAGCAGT 1300582
Query 6946 TTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGTAA--CA--GGTC---TTGAA 6995
|||| || ||||| || || | ||||| |||||| | || |||| ||| |
Sbjct 1300583 CTCGATACCGAGAGAGAGCGGCGCAACGTCGAGCAAGAGGATTTCATTGGTCGACTTGGA 1300642
Query 6996 CAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCG 7055
||| || || || | | || || || ||||| | || ||||| ||||| |
Sbjct 1300643 -AGAG--GTA----TCGCCAGACAGAATAGCAGCCTGGACTGCAGCACCGTAGGCGACGG 1300695
Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115
| ||||| ||||| || | || || |||| || || || || | || || | | |
Sbjct 1300696 CTTCATCAGGGTTGATTGACTTGTTGGGTTCCTTGCCATTGAAGAAGTCGGAGACAAGCT 1300755
Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175
|| || || || || || || |||||||||||||||||||| | || || |
Sbjct 1300756 TCTGGATGCGAGGAATACGAGTGGAACCACCGACCAAAACGATTTCGTGGACCGAAGACT 1300815
Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235
| |||||||| | ||| || || || ||||| ||||| ||||| | ||
Sbjct 1300816 TGTCGATCTTGGCGTCGCGCAGCACACGCTCTACAGGCTCCATTGTGGATCGGAAGAGGT 1300875
Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295
| || || || || ||||| ||||| || ||||| || ||||| || | || ||||
Sbjct 1300876 CTTGGCAGAGCTCTTCGAAACGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGT 1300935
Query 7296 ATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCT 7355
| | ||| || ||||| |||| || || || | ||||| | || ||||| || ||||
Sbjct 1300936 AGAGCGAGTCGATTTCGATGGAGGTCTGGGCGGAAGAAGACAGAGTGCGCTTGGCACGCT 1300995
Query 7356 CACACGCCGTTCGTAAACGACGAAGGGCACG 7386
| || || || || | ||| || || |||||
Sbjct 1300996 CGCAAGCTGTGCGCAGACGTCGTAGAGCACG 1301026
>seq5
Length=3889323
Score = 194 bits (214), Expect = 2e-44
Identities = 369/541 (68%), Gaps = 7/541 (1%)
Strand=Plus/Plus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| || || ||||| ||||| || || | | |||||| |||||||| |||| ||
Sbjct 1949646 AGATCTTCGAAACGGGCACGAGTGATCTGGGCGTTGAAATCTTCGCCGTCGAATAATGAG 1949705
Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
|| || |||| || ||||| | |||| | | | |||| ||| || || || || |
Sbjct 1949706 TCGATCTCAACCGTGGTTTGGGTTCCGTTTGACAGA--GTTCTCTTGGCACGTTCGCAGG 1949763
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| || || | | ||||| ||||| | | || || || || ||||| || ||||
Sbjct 1949764 CGGTACGCAGTCTTCGAAGAGCACGGGCATCCCCAGACATGTCCTTCTTCGTCTTTCGTT 1949823
Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
||| || | |||||| |||||| | | |||||||||| ||| |||||||| |
Sbjct 1949824 GAAATTCCTTCTTGAAGTGCTCAAGGAGGTTGGTGTCGAAATCTTGACCGCCCAAGTGGG 1949883
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
| || || ||||| || |||||| |||| || |||| ||||| | || || ||||
Sbjct 1949884 TGTCGCCGGCGGTGGCCTTGACTGTGAAGACGCCGCCTTGGATGTTCAGCAGGGAGACAT 1949943
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTTCT 7598
| || ||||||||||| || || | ||||| ||||| | | ||| ||| |
Sbjct 1949944 CGAAAGTACCACCACCAAGATCGTAGATGAGGACGTTTCGCTCCTTCTCGGATTTTCCCG 1950003
Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
|||||||||| || ||||| || || || ||||| || || ||||| || ||| |
Sbjct 1950004 AGCCGAGACCGTAGGCAATAGCGGCGGCAGTAGGTTCGTTGATGATACGGAGGACGTTGA 1950063
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
|||||||||| | | ||||| || || ||||||| || || || || ||||| |
Sbjct 1950064 GGCCAGCAATGGCACCAGCATCCTTGGTGGCTTGTCTCTGGTTGTCATTGAAATAGGCTG 1950123
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778
|||| || || || || | || ||| ||||| ||||| | | || |||| || ||||
Sbjct 1950124 GGACGGTGACAACAGCTTTCGAGACCTTCTTGCCGAGCTTGGTCTCTGCGACTTCCTTCA 1950183
Query 7779 T 7779
|
Sbjct 1950184 T 1950184
>seq8
Length=1848290
Score = 138 bits (152), Expect = 1e-27
Identities = 239/342 (70%), Gaps = 14/342 (4%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || |||||||| || ||||| || ||| | |||||||| || | |||
Sbjct 152585 TCGAAGTCCTCGCCACCCAAATGAGTATCACCGTTGGTAGACTTGACTTCGAATACACC- 152527
Query 7517 CCTTCA--ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574
|||| || | | || || | ||| || ||||||||||| ||||| | || |
Sbjct 152526 -CTTCTGGATCTCAAGCACTGAGATATCGAAGGTACCACCACCGAGGTCGTA---GACTG 152471
Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| || || |||| ||| || ||||| || |||| || || || || ||||
Sbjct 152470 CGATCACGCGATCATCTTC---CTTTTCCAGACCATAGGCGAGCGCAGCAGCGGTAGGTT 152414
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692
| || | || || ||| || ||||||||||| ||| | || ||||| || |||||
Sbjct 152413 CGTTGACAACCCGTAGAACATTTAGGCCAGCAAT--TTGACCGGCGTCTTTTGTGGCTTG 152356
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
||| ||| |||||| |||||||| || || || ||||| |||| | |||| ||| ||
Sbjct 152355 TCGCTGCATATCGTTGAAGTAGGCAGGAACTGTGACGACGGCGTTCTTGACAGGCTTGCC 152296
Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794
|||||| | ||| ||| | || ||||| |||| || |||||
Sbjct 152295 GAGATATGCTTCAGCGGTCTCCTTCATCTTGGACAGGACCAT 152254
>seq4
Length=4310093
Score = 91.5 bits (100), Expect = 2e-13
Identities = 403/626 (64%), Gaps = 29/626 (5%)
Strand=Plus/Minus
Query 105462 TTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGC 105521
||| ||| ||||||| || || | |||||| | ||||| || || | || || |||
Sbjct 3511317 TTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGC 3511258
Query 105522 CTGATCAGGACAAAACAATGACCAATTACCATCGGAT----TCAACGCGTTTCATGAACA 105577
| || ||| || || | | ||| | | | || | || || || | ||||||||
Sbjct 3511257 TTCATGAGGGCAGAAAAGAGTCCATT---CCT-GGTTCTTCTCGACACGCTCCATGAACA 3511202
Query 105578 AATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGAT 105637
| || || ||||||| || | || ||||| || | | ||||| | || || |
Sbjct 3511201 AGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGT 3511142
Query 105638 TCAAACGAAT-TTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCA 105696
|| | | ||| |||| || | | ||| ||||||||||| || | |||| |||
Sbjct 3511141 TCTTTCTTAGATTCAAGAAG-TCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 3511083
Query 105697 ATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATA 105749
| || ||| ||| | ||||| || | ||| || | || || ||| |
Sbjct 3511082 AAAGCACCAGGTCGCTTGTTGCCGCCC----TGGTCGACGTAGCGGGCCGTATTGTTGAA 3511027
Query 105750 CACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTT 105809
|| || ||||| ||||| | |||| ||||||||||| ||||| ||| | ||
Sbjct 3511026 AACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCC 3510967
Query 105810 ATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGC 105869
| ||||||| | ||| | | | || || || ||||| ||| ||| ||
Sbjct 3510966 AGTTGCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGC 3510907
Query 105870 ACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAA 105929
||| || | ||| || || || || ||||| ||||| ||||| | | |||| |||
Sbjct 3510906 ACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAA 3510847
Query 105930 ACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAA 105988
|| || |||| || || ||| ||||| || |||||||| || || |||| ||||||
Sbjct 3510846 GCAGGAGGACAGCTG-GGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAG 3510788
Query 105989 TGAACAAACCTTTCG---ATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTC 106045
| || || | | | |||| | | |||||| || | | | |||||||||| |
Sbjct 3510787 T-AAAGCACTTCTGGGACATAAGG--TTGTATGTCTCAATGGTCTTCTCAATATCGTCAC 3510731
Query 106046 CATGAATACCAATAGCGACGCGCATA 106071
| || ||||||| ||| || ||||||
Sbjct 3510730 CGTGGATACCAACAGCCACACGCATA 3510705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132696790920
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