Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 307 1e-78 seq5 194 2e-44 seq8 138 1e-27 seq4 91.5 2e-13 >seq3 Length=4945454 Score = 307 bits (340), Expect = 1e-78 Identities = 487/693 (70%), Gaps = 14/693 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| | |||||||| |||||||| Sbjct 1301164 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTAGACTTGACTTCGAAGATACCC 1301223 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| ||| | | | ||| ||||| || ||||| ||||| || || || ||||| || Sbjct 1301224 TCTTCGATGGTCAGGAGCGACACATCGAAGGTACCGCCACCGAGATCGAAGATGAGGACA 1301283 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || | ||||| |||||||| || || || || || || || || || Sbjct 1301284 TTGCGCTCACCCTCGGTCTTCTTGTCGAGACCATAGGCAATGGCGGCGGCAGTCGGCTCG 1301343 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || |||| || |||| || || || || || | || ||||| || ||||| || Sbjct 1301344 TTGATGATACGGAGGACA-TTGAGACCTGCGATCAAACCTGCGTCTTTTGTGGCTTGACG 1301402 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || ||||| ||||| || ||||| || ||||| |||| | || | |||||| Sbjct 1301403 TTGGGAGTCGTTGAAGTATGCGGGGACAGTGACGACAGCGTTGTTAACGGTGCCACCGAG 1301462 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || || || ||| | ||| |||| || || |||||||| || || |||||||| | | Sbjct 1301463 GTATGACTCAGCGGTCTCTCTCATCTTTGTGAGAACCATTGACGAGATCTCTTCGGGTGT 1301522 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT--ATCCGCAG-CACC 7872 || |||||| |||| || || || || |||||||| | ||| || ||| | || | Sbjct 1301523 GAATTGTTTCTTTTCGCCTTTGAATTCGACTTCAATGACGGGCTTGCCTCCCTTGTCAAC 1301582 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | ||||| | | | | ||||| ||| ||||||| | || | || || Sbjct 1301583 G------ACCTTGAAAGGAAAGTGCTTCATGTCGGCTTGGACTTCGGCATCAGCGAATTT 1301636 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||||| || ||||| || || || |||||||| | || ||||| || ||| || Sbjct 1301637 CCGGCCGATCAGTCGCTTCGCGTCGAAGACTGTGTTCTGAGGATTCATAGCGACTTGATT 1301696 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| || || || || |||||||| || | | || ||||| ||||| | || ||||| Sbjct 1301697 CTTGGCGGCATCACCAATAAGACGCTC---AGTGTCGGTAAAGGCGACAAAGGAGGGGGT 1301753 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 ||||| || ||||||||||| ||||| || || | |||||| | | | ||| ||| || Sbjct 1301754 GGTTCGGTTGCCTTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCGGAAGATGCCTAC 1301813 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || || |||| ||| ||||| || Sbjct 1301814 GCATGAGTAGGTAGTACCTAGATCGATACCTAT 1301846 Score = 145 bits (160), Expect = 1e-29 Identities = 559/871 (64%), Gaps = 23/871 (3%) Strand=Plus/Plus Query 6529 TTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTT---TCATCTTCATCTTTATA 6585 ||| ||||||||||||||| || | ||| ||| ||||| ||| | || || Sbjct 1300166 TTCCAGACCATTCTTCGCCGAGA---TACGAGCGGACTCGGCCTCATCCTCAGCCTTGTA 1300222 Query 6586 CTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATT 6645 ||| || || ||| | ||| || || ||||| || || | | ||||| || || Sbjct 1300223 CTTCTCGGCCTCTGACAGCATACGCTCGATATCTTCCTTGGACAGACGACCCTTGTCGTT 1300282 Query 6646 CGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAAT 6705 || || |||||| | || || || | |||| || |||| || |||| || Sbjct 1300283 GGTGATGACAATCTTGTTCGACTTGCCGGTACCCTTCTCGACAGCGGACACGTTCATGAT 1300342 Query 6706 ACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGG 6765 |||||| ||||||| ||||||| | || | || || || ||| | || || | ||| Sbjct 1300343 ACCATTGGCATCAAGATCGAACGTGACCTCGATCTGAGGAACACCACGAGGAGCAGGTGG 1300402 Query 6766 AATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACC 6825 ||| || | | || || | || || | |||| ||| | | ||| ||||| Sbjct 1300403 AATGCCGGAGAGCTCGAACTTGCCCAGCAGGTTGTTGTCCTTGGTACGAGCACGCTCACC 1300462 Query 6826 TTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTC 6885 ||| ||||||| || ||| | ||||| || || || |||||| | | Sbjct 1300463 TTCGTAGACTTGGATGAGCACACCTGGTTGGTTGTCGGAAAAGGTGGAGAAGGTCTCGGA 1300522 Query 6886 TTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGT 6945 ||||| | ||||| || || || | | || | || ||||| | |||||| ||| Sbjct 1300523 CTTCTTGGTGGGAATGGTAGTGTTCCGCTTGATGAGAGGCGTCATGACACCACCAGCAGT 1300582 Query 6946 TTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAGAGTAA--CA--GGTC---TTGAA 6995 |||| || ||||| || || | ||||| |||||| | || |||| ||| | Sbjct 1300583 CTCGATACCGAGAGAGAGCGGCGCAACGTCGAGCAAGAGGATTTCATTGGTCGACTTGGA 1300642 Query 6996 CAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCG 7055 ||| || || || | | || || || ||||| | || ||||| ||||| | Sbjct 1300643 -AGAG--GTA----TCGCCAGACAGAATAGCAGCCTGGACTGCAGCACCGTAGGCGACGG 1300695 Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 | ||||| ||||| || | || || |||| || || || || | || || | | | Sbjct 1300696 CTTCATCAGGGTTGATTGACTTGTTGGGTTCCTTGCCATTGAAGAAGTCGGAGACAAGCT 1300755 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 || || || || || || || |||||||||||||||||||| | || || | Sbjct 1300756 TCTGGATGCGAGGAATACGAGTGGAACCACCGACCAAAACGATTTCGTGGACCGAAGACT 1300815 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 | |||||||| | ||| || || || ||||| ||||| ||||| | || Sbjct 1300816 TGTCGATCTTGGCGTCGCGCAGCACACGCTCTACAGGCTCCATTGTGGATCGGAAGAGGT 1300875 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | || || || || ||||| ||||| || ||||| || ||||| || | || |||| Sbjct 1300876 CTTGGCAGAGCTCTTCGAAACGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGT 1300935 Query 7296 ATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCT 7355 | | ||| || ||||| |||| || || || | ||||| | || ||||| || |||| Sbjct 1300936 AGAGCGAGTCGATTTCGATGGAGGTCTGGGCGGAAGAAGACAGAGTGCGCTTGGCACGCT 1300995 Query 7356 CACACGCCGTTCGTAAACGACGAAGGGCACG 7386 | || || || || | ||| || || ||||| Sbjct 1300996 CGCAAGCTGTGCGCAGACGTCGTAGAGCACG 1301026 >seq5 Length=3889323 Score = 194 bits (214), Expect = 2e-44 Identities = 369/541 (68%), Gaps = 7/541 (1%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || || || ||||| ||||| || || | | |||||| |||||||| |||| || Sbjct 1949646 AGATCTTCGAAACGGGCACGAGTGATCTGGGCGTTGAAATCTTCGCCGTCGAATAATGAG 1949705 Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || || |||| || ||||| | |||| | | | |||| ||| || || || || | Sbjct 1949706 TCGATCTCAACCGTGGTTTGGGTTCCGTTTGACAGA--GTTCTCTTGGCACGTTCGCAGG 1949763 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | | ||||| ||||| | | || || || || ||||| || |||| Sbjct 1949764 CGGTACGCAGTCTTCGAAGAGCACGGGCATCCCCAGACATGTCCTTCTTCGTCTTTCGTT 1949823 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 ||| || | |||||| |||||| | | |||||||||| ||| |||||||| | Sbjct 1949824 GAAATTCCTTCTTGAAGTGCTCAAGGAGGTTGGTGTCGAAATCTTGACCGCCCAAGTGGG 1949883 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || ||||| || |||||| |||| || |||| ||||| | || || |||| Sbjct 1949884 TGTCGCCGGCGGTGGCCTTGACTGTGAAGACGCCGCCTTGGATGTTCAGCAGGGAGACAT 1949943 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTTCT 7598 | || ||||||||||| || || | ||||| ||||| | | ||| ||| | Sbjct 1949944 CGAAAGTACCACCACCAAGATCGTAGATGAGGACGTTTCGCTCCTTCTCGGATTTTCCCG 1950003 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658 |||||||||| || ||||| || || || ||||| || || ||||| || ||| | Sbjct 1950004 AGCCGAGACCGTAGGCAATAGCGGCGGCAGTAGGTTCGTTGATGATACGGAGGACGTTGA 1950063 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 |||||||||| | | ||||| || || ||||||| || || || || ||||| | Sbjct 1950064 GGCCAGCAATGGCACCAGCATCCTTGGTGGCTTGTCTCTGGTTGTCATTGAAATAGGCTG 1950123 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 |||| || || || || | || ||| ||||| ||||| | | || |||| || |||| Sbjct 1950124 GGACGGTGACAACAGCTTTCGAGACCTTCTTGCCGAGCTTGGTCTCTGCGACTTCCTTCA 1950183 Query 7779 T 7779 | Sbjct 1950184 T 1950184 >seq8 Length=1848290 Score = 138 bits (152), Expect = 1e-27 Identities = 239/342 (70%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || |||||||| || ||||| || ||| | |||||||| || | ||| Sbjct 152585 TCGAAGTCCTCGCCACCCAAATGAGTATCACCGTTGGTAGACTTGACTTCGAATACACC- 152527 Query 7517 CCTTCA--ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 |||| || | | || || | ||| || ||||||||||| ||||| | || | Sbjct 152526 -CTTCTGGATCTCAAGCACTGAGATATCGAAGGTACCACCACCGAGGTCGTA---GACTG 152471 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || || || |||| ||| || ||||| || |||| || || || || |||| Sbjct 152470 CGATCACGCGATCATCTTC---CTTTTCCAGACCATAGGCGAGCGCAGCAGCGGTAGGTT 152414 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 | || | || || ||| || ||||||||||| ||| | || ||||| || ||||| Sbjct 152413 CGTTGACAACCCGTAGAACATTTAGGCCAGCAAT--TTGACCGGCGTCTTTTGTGGCTTG 152356 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| ||| |||||| |||||||| || || || ||||| |||| | |||| ||| || Sbjct 152355 TCGCTGCATATCGTTGAAGTAGGCAGGAACTGTGACGACGGCGTTCTTGACAGGCTTGCC 152296 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 |||||| | ||| ||| | || ||||| |||| || ||||| Sbjct 152295 GAGATATGCTTCAGCGGTCTCCTTCATCTTGGACAGGACCAT 152254 >seq4 Length=4310093 Score = 91.5 bits (100), Expect = 2e-13 Identities = 403/626 (64%), Gaps = 29/626 (5%) Strand=Plus/Minus Query 105462 TTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGC 105521 ||| ||| ||||||| || || | |||||| | ||||| || || | || || ||| Sbjct 3511317 TTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGC 3511258 Query 105522 CTGATCAGGACAAAACAATGACCAATTACCATCGGAT----TCAACGCGTTTCATGAACA 105577 | || ||| || || | | ||| | | | || | || || || | |||||||| Sbjct 3511257 TTCATGAGGGCAGAAAAGAGTCCATT---CCT-GGTTCTTCTCGACACGCTCCATGAACA 3511202 Query 105578 AATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGAT 105637 | || || ||||||| || | || ||||| || | | ||||| | || || | Sbjct 3511201 AGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGT 3511142 Query 105638 TCAAACGAAT-TTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCA 105696 || | | ||| |||| || | | ||| ||||||||||| || | |||| ||| Sbjct 3511141 TCTTTCTTAGATTCAAGAAG-TCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 3511083 Query 105697 ATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATA 105749 | || ||| ||| | ||||| || | ||| || | || || ||| | Sbjct 3511082 AAAGCACCAGGTCGCTTGTTGCCGCCC----TGGTCGACGTAGCGGGCCGTATTGTTGAA 3511027 Query 105750 CACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTT 105809 || || ||||| ||||| | |||| ||||||||||| ||||| ||| | || Sbjct 3511026 AACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCC 3510967 Query 105810 ATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGC 105869 | ||||||| | ||| | | | || || || ||||| ||| ||| || Sbjct 3510966 AGTTGCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGC 3510907 Query 105870 ACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAA 105929 ||| || | ||| || || || || ||||| ||||| ||||| | | |||| ||| Sbjct 3510906 ACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAA 3510847 Query 105930 ACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAA 105988 || || |||| || || ||| ||||| || |||||||| || || |||| |||||| Sbjct 3510846 GCAGGAGGACAGCTG-GGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAG 3510788 Query 105989 TGAACAAACCTTTCG---ATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTC 106045 | || || | | | |||| | | |||||| || | | | |||||||||| | Sbjct 3510787 T-AAAGCACTTCTGGGACATAAGG--TTGTATGTCTCAATGGTCTTCTCAATATCGTCAC 3510731 Query 106046 CATGAATACCAATAGCGACGCGCATA 106071 | || ||||||| ||| || |||||| Sbjct 3510730 CGTGGATACCAACAGCCACACGCATA 3510705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132696790920