Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 223 4e-53 seq2 102 1e-16 seq6 91.5 2e-13 >seq4 Length=4310093 Score = 223 bits (246), Expect = 4e-53 Identities = 1165/1831 (64%), Gaps = 59/1831 (3%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 ||| | | ||| || || ||||| || ||||||||||| ||||| || | ||| Sbjct 3512423 GCCATGGTGCGGAGGTAGTACATGCCAGTTTTGAGACCCATTTTCCAGCCGGCAAAGTGC 3512364 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || || | || |||| | || || | || | ||||| || || ||||| Sbjct 3512363 ATGGATGTGATTTTGCCCATGGTGGGTTCTTTCAAGTGGATGTTCAAGGATTGGGACTGG 3512304 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAG 109578 |||||||| || ||||| |||||||| | || |||| |||||| ||||||||| Sbjct 3512303 TCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGATAGTTCGTTGGCTGATTTCCCAG 3512244 Query 109579 ACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCA 109638 ||||||||||||| |||||| || | || |||| |||||| |||| || ||| Sbjct 3512243 ACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGAACCGAACCA 3512184 Query 109639 CCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCG 109698 || | | || | | |||||| | | ||||||||||| | | ||||| Sbjct 3512183 CCGTCGGCGATGATACGGTTCTTCATGTTATCTGACCAGAGACCCAGATCGACCAGATCC 3512124 Query 109699 TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758 | | || | |||||| || || |||||||| || || ||| ||||||| Sbjct 3512123 TTCAAGAGCCACGGGTTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATG 3512064 Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818 || | || || || || || || || |||||||| || || || | || || || || Sbjct 3512063 TTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTA 3512004 Query 109819 GGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTTTACCCGCTCACGCA 109876 ||||| ||||| | ||| ||| ||| || | ||| | | | | | | | | || Sbjct 3512003 GGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCATACTTGGCAATGTCGG--CCTTCA 3511946 Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 | |||||| || | | | | || || ||| |||||| || || | Sbjct 3511945 AAGAGTCCCAGTCCCACAGGTC---AGATGGGGT---GACATTCCACATGTCATACTGGA 3511892 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | || | | | || |||| | | |||| || | || | || || | Sbjct 3511891 GCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTTGCAA 3511832 Query 109997 ACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGA 110056 |||| | ||||| || |||||||| || || |||||||| || || || | Sbjct 3511831 GCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGTT 3511772 Query 110057 GGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACCC 110115 | |||| ||| | |||| ||||||||| | || || || || |||| || ||||| Sbjct 3511771 GTCGAGCCTCCGGAGAGTCAAAGGGAAGA-CGCAGAGCAAGGAAGGCATCTGCAAGACCT 3511713 Query 110116 TGAACACCGAGACCAATGGGGCGATGCTTCATGTTA--GAGCGTCG-AGCAGTTTCTACG 110172 ||||| || || ||||| || ||||| ||| ||| | ||| ||| ||| Sbjct 3511712 TGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTTCTTCGCCTCAG---GGACG 3511656 Query 110173 GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCA 110232 || || ||||| |||||||| || | ||| || || | |||| ||| Sbjct 3511655 GGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCA 3511596 Query 110233 TGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT----GACATATTTGGGGAGAGC 110288 || || || | || || ||| | | ||| ||| | |||| || || Sbjct 3511595 TGAAGGCGACCGAAGTCATAC----TCGCCACGAGATTGGTCGACGAAGGTGGGAAGGGC 3511540 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 | || || | |||||| |||| | ||||||| | ||| | || | || || || Sbjct 3511539 CAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAACTCGACGATCTCGGT 3511480 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 || | || || || |||| |||||||||||||| || || |||||| || Sbjct 3511479 GCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGC 3511420 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 |||||| ||||||||||| || ||||| || || ||||| | || ||||| || | ||| Sbjct 3511419 ATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCA 3511360 Query 110469 TA-CATCGGCGGCGGGGACAGT-TG-CGTTAGCGA-GACCTTCCTCCTCGTACTTGGTGT 110524 | | || | ||| ||| || || || || | | || |||| || || | || Sbjct 3511359 CAGCTTCTG-GGCCTTGACGGTCTGACG---GCCACGGCCCTCCTTTTCATATCTCTCGT 3511304 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 | | |||| ||| || | ||||| ||||||| || || || | | || |||| Sbjct 3511303 AGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGA 3511244 Query 110585 AGAGGGACCAATTTCC--ACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642 | || | ||| |||| || ||| || | || |||||||| |||||| ||||||| Sbjct 3511243 AAAGAGTCCA--TTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACAT 3511186 Query 110643 CGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAA 110702 || |||| ||||||||| ||| | ||||| | || ||||| | ||| | ||| Sbjct 3511185 AGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAA 3511126 Query 110703 AAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG 110762 ||||| | || ||| | ||||||||| || || |||| || | | || | | || Sbjct 3511125 GAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACC---AGGTCG 3511069 Query 110763 ------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 || |||||| || ||||| || || ||||| || | | ||||||||| Sbjct 3511068 CTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAAT 3511009 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876 | |||| ||| ||||| || || ||| ||| | | ||||| ||| ||| Sbjct 3511008 GAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTG 3510949 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTAC 110935 | || | ||| || ||||| || ||| || ||||| ||| ||||||| Sbjct 3510948 GGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCT-TGAGTGTGT 3510890 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 |||| || || || || ||| |||| || | || | ||||| || |||| ||| | Sbjct 3510889 CATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGG 3510830 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA-CAGACCTTGGGAC 111054 | | || ||||| ||||||||||| || |||| ||||||| | || || | |||||| Sbjct 3510829 GCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTC-TGGGAC 3510771 Query 111055 ATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACT 111114 || ||||||||| || | | | ||| | |||||| ||||||| || || Sbjct 3510770 ATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAACAGCCACA 3510711 Query 111115 CGCATGAACATATATTGAGG-CGTT--TCGATTAGCTTTCC-ATCAACACGCTGAAGGTA 111170 ||||| | ||| | || || |||| ||| | |||| || || || | ||||| Sbjct 3510710 CGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGCCGATTTTCA----GCAGGTA 3510655 Query 111171 ACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 |||||| | ||||||| |||||||||| Sbjct 3510654 TGACTTCTCCAACGTCTTGAAACCAAAGTAT 3510624 >seq2 Length=5161063 Score = 102 bits (112), Expect = 1e-16 Identities = 274/411 (67%), Gaps = 11/411 (3%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| ||||| ||||| | | || | ||| |||| |||| | ||| || | Sbjct 4401733 CGATCGAAGCGACCGGGGCGCATCAAGGCCTTATCCAGAACATCGGGTCTGTTCGTGCCC 4401674 Query 11563 GCAATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| |||| ||| || | ||| ||| |||||||| || || | | |||| Sbjct 4401673 GCGAGGACGACAACTTGC---TCCGAGGTGTTGAAGCCGTCCATCTCGGTCAAGATCTGG 4401617 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTC--TTA 11676 |||| || ||| ||||| ||||| | || | |||| | | || || Sbjct 4401616 TTGAGGGTTGATTCTCGCTCGTCGTTCCCACCGCCAAAGTTCTGCTTAGCTCTCGATTTG 4401557 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| ||||| || ||||||||||| | ||| |||||| ||| | || | || Sbjct 4401556 CCGATGGCGTCGATTTCATCGATGAAGATGATGCACGGTGTGTTCTTCCTGGCGTTGGCG 4401497 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || | || || || || | |||||||| |||||||| |||||||| | | | Sbjct 4401496 AACAAGTCTCGCACTCGAGAAGGGCCAACACCGACGAACATTTCAACGAACTCGGAACCC 4401437 Query 11797 GAACACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 | | || || | ||||||||| ||||| || || | || ||| || || || || Sbjct 4401436 G-AGACGGAGTAGAAGGGAACGCCTGACTCGCCGGCTGTAGCCTTAGCCAGCAGTGTTTT 4401378 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||| |||||||| | ||| | ||| | |||||| || |||||||| ||||| Sbjct 4401377 ACCTGTACCAGGAGGACCGGAGAGGATGGCGCCGCGAGGGATCTTTGCACC 4401327 >seq6 Length=3486194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/243 (69%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| ||| || | || ||||| ||||||||||| ||||| ||| || ||| Sbjct 2268697 GCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCA 2268638 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| || || | |||| ||||| || || ||| ||| ||||||||||||||| Sbjct 2268637 GGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATA 2268578 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAA 119671 ||||| || |||||||| | || || | ||| ||| || || ||| || || Sbjct 2268577 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAA-GTGGACTCCTTATCAGAGAT 2268519 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 ||| | |||||||||| |||||| ||||| |||| || | ||| || ||||| Sbjct 2268518 CCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCGAA 2268459 Query 119732 AAG 119734 || Sbjct 2268458 CAG 2268456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975904291400