Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 217 2e-51 >seq4 Length=4310093 Score = 217 bits (240), Expect = 2e-51 Identities = 687/1049 (65%), Gaps = 27/1049 (3%) Strand=Plus/Minus Query 106278 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 106337 |||| || ||||||||||| || | |||||||||| || ||||||||| ||| || Sbjct 3511726 CATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTTCTTCG 3511667 Query 106338 CAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAA 106394 | |||| |||||||| | || |||| |||| | ||| | ||| || || | Sbjct 3511666 C---CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGTGACCA 3511610 Query 106395 TCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACT 106454 | |||| |||||||| | | ||| | || | || | ||| | Sbjct 3511609 CTTGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGACGAAGG 3511550 Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514 | |||||||| | || ||||||||||| ||||| ||| || | ||| |||| | Sbjct 3511549 TGGGAAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAACTCGA 3511490 Query 106515 AAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTT 106574 || || || || | || || || ||| || ||||| ||||| ||||| ||||| Sbjct 3511489 CGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCC 3511430 Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634 ||||||| ||||||||||||||||||||||| || || ||||| ||||| | || |||| Sbjct 3511429 TGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAA 3511370 Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCTCGTA 106692 | || | ||||| | || | | || | || | | |||| || |||||| || || Sbjct 3511369 TCGCATACCACAGCTTCTGGGCCTTG-ACGGT-CTGACGGCCACGGCCCTCCTTTTCATA 3511312 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 | |||||| | | |||||| || || | || | || |||||||| | | Sbjct 3511311 TCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATG 3511252 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || |||||||||| ||||| || ||| || |||| |||||| | ||| || | Sbjct 3511251 AGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGT 3511192 Query 106813 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 ||||| | | || || || | ||| || | ||||| | || ||||| || || Sbjct 3511191 CCACATAGCATAGAACAGGTCACGGGCACGGA-CTTCTTCCTTGCCGTGGTTCTTTCTTA 3511133 Query 106872 -ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TA 106924 | |||| ||| || | || ||| |||||||||||||| || |||| || | | Sbjct 3511132 GATTCAA-GAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCA 3511074 Query 106925 GATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 | || ||| | | ||||| || | || ||||| || || ||| || || || | Sbjct 3511073 GGTCGCTTGTTGCCGCCC----TGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAA 3511018 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 107043 ||| ||||| | |||| |||| ||||| || || ||| || | | || | Sbjct 3511017 CATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACG 3510958 Query 107044 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 107103 | ||| | | || || || ||||| ||| ||||| ||||| | | Sbjct 3510957 GATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTT 3510898 Query 107104 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 107163 || || ||||||| || | ||| || ||||| || |||| | |||||| ||| Sbjct 3510897 GAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGA 3510838 Query 107164 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATAC 107222 || ||| || |||||| || ||||||||||| || |||| || ||| | || || Sbjct 3510837 CAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTT 3510778 Query 107223 CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 107282 | |||||||| || ||||||||| | | ||||| || || |||||||| || | Sbjct 3510777 C-TGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAA 3510719 Query 107283 TGGCCACACGCATAAACATGTATTGGGGT 107311 ||||||||||||| ||||| || ||| Sbjct 3510718 CAGCCACACGCATAATCATGTGCTGTGGT 3510690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980704128120