Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq4 105 8e-18 >seq4 Length=4310093 Score = 105 bits (116), Expect = 8e-18 Identities = 264/396 (67%), Gaps = 5/396 (1%) Strand=Plus/Minus Query 154713 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 || || || |||||||| | || || || ||||| || || ||| |||| ||||||| Sbjct 1608455 AAAGTCTGCTTGATACCGGTTTCTGCCCACGGAACAAACCCCGCTTCAGCTGCCATGGCA 1608396 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGAT-GGTAACATAGACATCAAAGAT 154829 || ||||||||||| | ||||||||| | || || || | ||| || ||||| Sbjct 1608395 GGAATGAAAGTTGTTCCACTGAAGTGTGATACCAAGACCGGCAATCTGGACGTCCAAGAT 1608336 Query 154830 CTAGAGAAGAAA-GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCC 154888 || || | || || | | | | | ||| || | ||| ||||| || || || Sbjct 1608335 CTGAAGGAAAAGTGCGAGAA-GCACAAGGATGACTTGGCTGCTATCATGATCACCTATCC 1608277 Query 154889 ATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAA 154948 ||| |||||| || || || || ||| | | ||| |||| ||||| || | Sbjct 1608276 CAGTACGTTTGGTGTCTTCGAGCCTGCGATCAGAGAAGTTTGTGAGATTGTTCACGAGCA 1608217 Query 154949 TGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACC 155008 ||| || || || || | |||||||||||||| ||||| || | || | || || Sbjct 1608216 TGGGGGCCAAGTTTACATGGATGGAGCAAATCTCAATGCTCAAATCGGTTTGTGCAACCC 1608157 Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACA 155068 | || ||| || || || || ||||| || | || || || || || || || || Sbjct 1608156 CGGGGATATTGGAGCCGACGTCTGCCATCTGAATCTGCACAAGACCTTTTGCATCCCTCA 1608097 Query 155069 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||| ||||| |||||||| || || || || ||||| Sbjct 1608096 TGGTGGTGGCGGTCCTGGGGTTGGACCGATTGGTGT 1608061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212705877920