Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 2e-29
seq4 91.5 3e-13
>seq5
Length=3889323
Score = 145 bits (160), Expect = 2e-29
Identities = 160/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| ||||||||||| |||||||| |||| ||| || | || |||||
Sbjct 1366556 ACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCTTCA 1366497
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || ||||| || ||||| || || ||||||||||| || ||||||||
Sbjct 1366496 AGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGG 1366437
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||| || ||||| || ||| || || |||||||| | |||
Sbjct 1366436 ATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGA---CTCGACCTCAAGGGTGATGGTC 1366380
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | ||| || ||||| | ||||||
Sbjct 1366379 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||||| || ||||| | |||| ||| || ||||| ||||| |||| || ||||
Sbjct 1367021 AGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGG 1366962
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||| |||||||| || |||||||| | || || ||||| || || ||||| ||
Sbjct 1366961 CCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGGATGCCCTCC 1366902
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || |||||| || ||||||||||| || || || ||||| | |||
Sbjct 1366901 TTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAATGTA 1366842
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || ||||| || || ||||| | |||||
Sbjct 1366841 ATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | ||| || || || ||||| || || || || ||||| || | || ||||
Sbjct 1366793 AGTCTGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGG 1366734
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || || |||||||| || |||||||| | ||| || ||||| || || || || ||
Sbjct 1366733 CCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCC 1366674
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||||||||| ||||||||| ||||| || ||||| ||| || || || ||
Sbjct 1366673 TTGTCTTGAATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTG 1366614
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | || || ||||| | ||||||
Sbjct 1366613 ATAGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 1366576
Score = 127 bits (140), Expect = 5e-24
Identities = 153/207 (74%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || |||||||| || || ||||||||| || || | ||||| ||||||||
Sbjct 1366323 GTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTG 1366264
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||||| |||||||| || || || || || |||||||||||||| ||||| || || ||
Sbjct 1366263 TTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 1366204
Query 195057 TTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113
|||||| || || |||||||| ||| || || |||||||| | ||||| ||
Sbjct 1366203 GCTCTTGACATTGTCGATGGTGTCGCTCGA---CTCAACCTCAAGGGTGATTGTCTTGCC 1366147
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || ||||| | |||||
Sbjct 1366146 GGTGAGGGTCTTGACGAAGATCTGCAT 1366120
>seq4
Length=4310093
Score = 91.5 bits (100), Expect = 3e-13
Identities = 187/278 (67%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
||||| || || ||||| | || | |||||| || | || | | || ||| |||
Sbjct 3511177 TTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGGAATGG 3511236
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| |||||||| || ||||||| || ||||| | |||||| || || ||||| ||
Sbjct 3511237 ACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGTCTACGGCGATGAGTTTAAG 3511296
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768
|| || || ||||| ||||| ||||| | | | || ||| |||||||| |
Sbjct 3511297 GAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCAGACCGTCAAGGCCCAGAAG 3511356
Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828
|||||| || || |||| || || |||| |||| |||| || ||||||
Sbjct 3511357 CTGTGGTATGCGATTCTTGAGGCTCAGACCGAGACCGGTACTCCCTACATGCTCTACAAG 3511416
Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
|||||| | | ||||| |||||||||||||| ||
Sbjct 3511417 GATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGG 3511454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481415201971
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |