Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 3e-14 >seq5 Length=3889323 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || || || ||||| |||||| | || | || || || || ||||| ||||| Sbjct 1366538 TCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAAG 1366479 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||| || | || | ||||||||||| ||||| |||||| Sbjct 1366478 ATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTG 1366419 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | | ||| || || | ||| ||||| || || ||||||||||| || Sbjct 1366418 TCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 1366359 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 1366358 AAGATTTGCAT 1366348 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||| |||| ||| | ||||| || ||||||||||| ||||| || || |||| | Sbjct 1367018 CTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCG 1366959 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || ||||| || ||||| || || | || |||||||| | || | ||||||||| Sbjct 1366958 TCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGGATGCCCTCCTTG 1366899 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| ||||| | || | || | |||||| || | || ||| Sbjct 1366898 TCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAATGTAATG 1366839 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || | ||||| || |||||||||||| Sbjct 1366838 GTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 1366803 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || || |||| | || || ||||| || ||||| || Sbjct 1366767 TTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 1366708 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | ||| |||||||| | || | ||||||||||| ||| ||| |||||| Sbjct 1366707 GATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGAATTTTCGACTTGACGTT 1366648 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || || || || || | || || || || |||||||| |||||||| Sbjct 1366647 GTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTGCCCGTGAGGGTCTTCAC 1366588 Query 34970 AAAGATCTGCAT 34981 ||||| ||||| Sbjct 1366587 GAAGATTTGCAT 1366576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633548565864