Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 3e-14
>seq5
Length=3889323
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || || || ||||| || || ||||||||| | || | | |||| ||
Sbjct 1366328 ACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCG 1366269
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || ||||| || || || | ||||| ||||| || ||||||||||| || || ||
Sbjct 1366268 AGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 1366209
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | ||||| || || || ||||| |||| || |||
Sbjct 1366208 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTG 1366149
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACG 101476
||||| | || || || || ||||||||| || ||
Sbjct 1366148 CCGGTGAGGGTCTTGACGAAGATCTGCATGATTGCG 1366113
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | ||| ||||| ||||| || || || ||||| || | || |||| | | || ||
Sbjct 1366785 AACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTC 1366726
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || || || ||||| ||||| || ||||| || || || || || |||||
Sbjct 1366725 AAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTG 1366666
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
|||||| || || | || | || || || | ||| || || || |||| || ||
Sbjct 1366665 AATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTT 1366606
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||| || | || || || || || ||||||
Sbjct 1366605 GCCCGTGAGGGTCTTCACGAAGATTTGCATG 1366575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278337214641
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |