Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 3e-14 >seq5 Length=3889323 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || ||||| || || ||||||||| | || | | |||| || Sbjct 1366328 ACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCG 1366269 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || ||||| || || || | ||||| ||||| || ||||||||||| || || || Sbjct 1366268 AGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 1366209 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | ||||| || || || ||||| |||| || ||| Sbjct 1366208 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTG 1366149 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACG 101476 ||||| | || || || || ||||||||| || || Sbjct 1366148 CCGGTGAGGGTCTTGACGAAGATCTGCATGATTGCG 1366113 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| ||||| ||||| || || || ||||| || | || |||| | | || || Sbjct 1366785 AACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTC 1366726 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || || || ||||| ||||| || ||||| || || || || || ||||| Sbjct 1366725 AAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTG 1366666 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || || | || | || || || | ||| || || || |||| || || Sbjct 1366665 AATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTT 1366606 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||| || | || || || || || |||||| Sbjct 1366605 GCCCGTGAGGGTCTTCACGAAGATTTGCATG 1366575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278337214641