Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 311 2e-79 seq6 123 5e-23 >seq4 Length=4310093 Score = 311 bits (344), Expect = 2e-79 Identities = 1098/1698 (65%), Gaps = 68/1698 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | | ||| ||| ||||||| || ||||||||||| || || Sbjct 3512450 ACAGTGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATGCCAGTTTTG 3512391 Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGG 212672 || ||| | ||||||| | |||||| | ||||| ||| || | | | Sbjct 3512390 AGACCCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCA------TGGTGGGT 3512337 Query 212673 TCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTG 212732 || | | |||| | ||||| ||| || |||||| ||||| | | ||| Sbjct 3512336 TCTTTCAAGTGG---------ATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGA 3512286 Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 || || ||||| | | |||| || ||| || ||||| || |||||| | | | | Sbjct 3512285 TCGGCCGCCATCTGGAGGATAGTTCGTTGGCTGATTTCCCAGACAGTCTTGTACAGTGCC 3512226 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGC 212849 |||| ||| | |||| | |||||||||||| || || || | || ||| | | Sbjct 3512225 TTGATGTCGGCAGGGATGTTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGG 3512166 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGGTGAGG 212908 | | ||||| || |||||| ||| | || |||| ||| | || || Sbjct 3512165 TTCTT---CATGTTATCTGACCAGAGACCCA-GATCGACCAGATCCTTCAAGAGCCACGG 3512110 Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 |||||| | |||||| ||||| | || || | | ||| | ||| ||||| || || Sbjct 3512109 GTTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGG 3512050 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 ||| | || |||||||| || |||||||| | || || || ||||| ||||| || Sbjct 3512049 CTCAAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAAC 3511990 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCC 213087 |||||| ||| | || || | || | | ||| ||| || | ||||||||| Sbjct 3511989 GAGGAGAGAGTTGCGAACACCATACTTGGCAATGTCGGCCTTCAAAGAGT-CCCAGTCCC 3511931 Query 213088 ATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 | | |||| || | || |||||||||||| |||| | ||||||| Sbjct 3511930 ACAGGTCAGATGGGG---------TGACATTCCACATGTCATACTGGAGCATGCCTTGTG 3511880 Query 213148 TCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACG 213207 || |||||||||| ||| | || | ||| |||||| | || |||||||| || | Sbjct 3511879 AGACTGGGCTGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTTGCAAGCTCGCACGAAG 3511820 Query 213208 CCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG-GCCTCT 213266 | || || || | ||||||||| ||||| |||| ||||||| || | | ||||| Sbjct 3511819 CAGTGAGAGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAG-TTGTCGAGCCTCC 3511761 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATG 213326 || || ||||| | || |||| |||| || || || || ||||| | | Sbjct 3511760 GGAGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGG 3511701 Query 213327 CCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAG 213386 || || |||| || | || ||| ||| ||| | ||| || ||||| | Sbjct 3511700 CCAATAGGTCGATGGCGCATATTACTCTTCTTCGCCTCAGGGACGGGATAGTAGTTGATG 3511641 Query 213387 TCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGA 213446 |||||||| ||||| | ||||| ||| |||||| ||||| | || | | || | Sbjct 3511640 TCGATGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCT----CATGAAGGCG--A 3511587 Query 213447 TTGAACACGTAGCCCCCG------TCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGG 213500 ||| | || | || | | || || || ||||| | | |||| Sbjct 3511586 CCGAAGTCATACTCGCCACGAGATTGGTCGACGAAGGTGGGAAGGGCCAGGGAAGCCAAA 3511527 Query 213501 TTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTG 213560 ||||| || || ||||| | | | ||| |||| | |||||||||||| || || | Sbjct 3511526 TTGCAGACAGCAACCTCGTCTGGCGCAGTGAACTCGACGATCTCGGTGCAAAGATTTGAG 3511467 Query 213561 CATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGC 213620 | ||| |||||||||| ||||| ||||| ||| |||| | ||||||||||||| Sbjct 3511466 CTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGC 3511407 Query 213621 ATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCC 213680 |||||||| | |||||||| ||| | | | || ||| ||| || | | |||| Sbjct 3511406 ATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCC 3511347 Query 213681 TTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGTAGAGCTCGTTG 213737 |||| | | ||||| || ||| | | || || || ||||||||||| || Sbjct 3511346 TTGA----CGGTCTGACGGCCACGGCCCT--CCTTTTCATATCTCTCGTAGAGCTCCTTA 3511293 Query 213738 AATTCGTGGCCCCAGACCCTGTCCAGTCCCGG-ACAGGATGCGGGACACATGAGGCTCCA 213796 || || | ||| |||| ||||||| || | ||| ||| || | || |||| Sbjct 3511292 AACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGG-CAGAAAAGAGTCCA 3511234 Query 213797 GTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 ||| | || |||| ||| | || |||||||| ||| ||| ||||| || ||||| Sbjct 3511233 TTCCTGGTTCTTCTC-GACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACA 3511175 Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915 |||| | || | || ||| || ||| || | |||| | |||||||||| Sbjct 3511174 GGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGA 3511115 Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCT 213972 || |||||||| ||||||| |||||||||||| || || | || | |||||||||| Sbjct 3511114 CATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCT 3511055 Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032 |||| || | |||| ||||||| | |||| | || | ||||| || || Sbjct 3511054 GGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATG 3510995 Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCC 214090 ||| || ||||| || || || ||||| | || | | | || ||| |||| || Sbjct 3510994 TTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAGA--CC 3510937 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 |||||||| ||| ||||||||||||||| ||| | | | || || |||||| | Sbjct 3510936 GATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTC 3510877 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCC 214210 ||||| ||||| | | || | |||||||||| || ||||||||| | | || Sbjct 3510876 GATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCC 3510817 Query 214211 AGAGTTGAAAAGCGTGGG 214228 | ||||| |||||||| Sbjct 3510816 GGCATTGAAGAGCGTGGG 3510799 >seq6 Length=3486194 Score = 123 bits (136), Expect = 5e-23 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 48124 GAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAA 48183 ||| | ||| ||||| || |||||| ||| || || || |||||| | || || || Sbjct 2268707 GAGGAGGCATGCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAA 2268648 Query 48184 GCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGA 48243 | |||||||||||| | ||| | |||||||||||||| || || || || ||||| Sbjct 2268647 GGTGAGACCAGGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGA 2268588 Query 48244 GAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTT 48303 |||||||| ||||| || || ||||| || || | | |||||| | | ||| Sbjct 2268587 AAAGAAGATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTT 2268528 Query 48304 GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTAT 48363 || |||||||| ||| |||||||| |||||||| |||||| || || || || || Sbjct 2268527 ATCAGAGATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGAT 2268468 Query 48364 GGC 48366 || Sbjct 2268467 AGC 2268465 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 48462 ACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGAT 48521 |||||||||| | || ||| ||||||||||| | | ||| | ||||||||| | Sbjct 2268317 ACCCGTAGAAACAGCGCGCTTCAGGTACCTGCACTTCGGCGCTGAAACGCTCCAGCAGGT 2268258 Query 48522 TCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGC 48581 |||| ||||| || || ||||||||||| ||||| ||||||||||| | ||| | || Sbjct 2268257 TCTCGTTGACAATGCCGTCTGAAGCAGCGAAGAAAGCAAGGACATGGGAGACGAAGTAGC 2268198 Query 48582 GCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTT 48638 | || | | | | || || ||| | || | |||||| |||||| ||||||| Sbjct 2268197 GTTCATCATTGTTCAGTCGGTTGTGCCAATCGTGCAGGTCTTTCGACAGGTCGACTTCTT 2268138 Query 48639 CCACAGTCCAGAAG 48652 | | ||||| ||| Sbjct 2268137 CTGCTGTCCAAAAG 2268124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532648625920