Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 172 1e-37 seq6 84.2 4e-11 >seq4 Length=4310093 Score = 172 bits (190), Expect = 1e-37 Identities = 812/1267 (64%), Gaps = 51/1267 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || || || || ||||||||||||||||||||| |||||||| | | | ||||| || Sbjct 3511817 GTGAGAGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGT-TGTCGAGCCTCCGG 3511759 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| ||||| | |||||| | ||| | || || || || || || || | || Sbjct 3511758 AGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCC 3511699 Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGC--CGCTTCTGGCACGGGATAAAAGTTGACG 221593 || || | || | | | || | | | ||| || || |||||||| |||||| | Sbjct 3511698 AATAGGTCGATGGCGCATATT--ACTCTTCTTCGCCTCAGGGACGGGATAGTAGTTGATG 3511641 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | || | |||| |||| | ||||| || | || Sbjct 3511640 TCGATGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAG------GCGA 3511587 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 ||| | ||||||| | ||| || || || | | ||||| | | Sbjct 3511586 CCGAAGTCATACTCGCCACGAGATTGG------TCGACGAAGGTGGGAAGGGCCAGGGAA 3511533 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGA 221771 |||| || || || || |||||||| || | || ||| | |||||| || || | Sbjct 3511532 GCCAAATTGCAGACAGCAACCTCGTC--TGGCGCAGTGAACTCGACGATCTCGGTGCAAA 3511475 Query 221772 GGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 | || || ||| ||||| |||| || || || || ||| | ||| || || Sbjct 3511474 GATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATC 3511417 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||||||||| ||||| || ||||| ||||||| | |||||| | ||| || Sbjct 3511416 CTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAG 3511357 Query 221890 TTCTCTGGCGCTC-ACCGTCCTCTTGACTGCA----CCCTCGGTCTTTTCATACCCGGTA 221944 | ||||| || || ||| |||| || ||||| ||||||||| | Sbjct 3511356 CT-TCTGGGCCTTGACGGTC----TGACGGCCACGGCCCTC---CTTTTCATATCTCTCG 3511305 Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGA-CACCTGGCGGGACA 222003 |||||| | ||||| || ||||| | || |||| ||||| | | | ||| || Sbjct 3511304 TAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGG-CA 3511246 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 | ||| |||| | || ||| | | ||| | || |||||| | ||| ||| |||||| Sbjct 3511245 GAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACAT 3511186 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | || || || | || || || ||| ||||| ||| || || |||| ||| Sbjct 3511185 AGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAA 3511126 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183 || ||||| | ||||||||||| |||||||| |||| ||| | ||| || |||||||| Sbjct 3511125 GAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTT 3511066 Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAG 222243 |||||| ||||| || || | || | |||||| | || | | || | || Sbjct 3511065 GTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAG 3511006 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGC 222303 || || ||| || || || || |||||| | || || | | | ||| Sbjct 3511005 CCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGC 3510946 Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363 | | ||||| ||||| ||| || ||||||||||| ||| ||||||| ||||| Sbjct 3510945 ATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATA 3510886 Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT-GAGATT 222422 ||||||||| || || ||||| | || | || || || || |||| || | | | Sbjct 3510885 GATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTG 3510826 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 |||| | | ||| || || |||||||| || || |||||| | | ||||| | Sbjct 3510825 TGGT-GTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAA 3510767 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATGGCGCATCT 222540 | | ||| ||||| | | | | || | ||| ||||| || | || | | || | Sbjct 3510766 GGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAACA-GCCACA-CG 3510709 Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGAC--CCTTGGAGCTGGAGAGCAGGTACGAT 222598 ||| ||||| ||| || | || | ||| |||| | | |||||||| || Sbjct 3510708 CATAATCATGTGCTGTGGTCGTTCGGC--GACTTGCTTGCCGATTTTCAGCAGGTATGAC 3510651 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 || |||| |||||||| |||||||| | | || ||||| ||| ||| || | ||| Sbjct 3510650 TTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGTCGTAGACAATGGCC 3510591 Query 222659 GCGTCCA 222665 | || || Sbjct 3510590 GAGTTCA 3510584 >seq6 Length=3486194 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || ||||| || || || || || ||||| ||||| || || || ||||| || || Sbjct 2268549 CGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATTTGCTGCGATT 2268608 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998 |||||||||||| ||||| ||||| || || |||||| || || |||||| Sbjct 2268609 TTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGAACTCATCTCT 2268668 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037 | || ||||| | |||| ||||||||| ||||| ||| Sbjct 2268669 CGTGATGAGGGCATGCACACAGATTTTGCATGCCTCCTC 2268707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844649062720