Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4 172 1e-37
seq6 84.2 4e-11
>seq4
Length=4310093
Score = 172 bits (190), Expect = 1e-37
Identities = 812/1267 (64%), Gaps = 51/1267 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| || || || ||||||||||||||||||||| |||||||| | | | ||||| ||
Sbjct 3511817 GTGAGAGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGT-TGTCGAGCCTCCGG 3511759
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| ||||| | |||||| | ||| | || || || || || || || | ||
Sbjct 3511758 AGAGTCAAAGGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCC 3511699
Query 221536 GATGGGCCTGTGTCTCCTGTTGGAAGCGGC--CGCTTCTGGCACGGGATAAAAGTTGACG 221593
|| || | || | | | || | | | ||| || || |||||||| |||||| |
Sbjct 3511698 AATAGGTCGATGGCGCATATT--ACTCTTCTTCGCCTCAGGGACGGGATAGTAGTTGATG 3511641
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | ||||| | || | |||| |||| | ||||| || | ||
Sbjct 3511640 TCGATGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAG------GCGA 3511587
Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713
||| | ||||||| | ||| || || || | | ||||| | |
Sbjct 3511586 CCGAAGTCATACTCGCCACGAGATTGG------TCGACGAAGGTGGGAAGGGCCAGGGAA 3511533
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGA 221771
|||| || || || || |||||||| || | || ||| | |||||| || || |
Sbjct 3511532 GCCAAATTGCAGACAGCAACCTCGTC--TGGCGCAGTGAACTCGACGATCTCGGTGCAAA 3511475
Query 221772 GGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829
| || || ||| ||||| |||| || || || || ||| | ||| || ||
Sbjct 3511474 GATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATC 3511417
Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889
|||||||||||| ||||| || ||||| ||||||| | |||||| | ||| ||
Sbjct 3511416 CTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAG 3511357
Query 221890 TTCTCTGGCGCTC-ACCGTCCTCTTGACTGCA----CCCTCGGTCTTTTCATACCCGGTA 221944
| ||||| || || ||| |||| || ||||| ||||||||| |
Sbjct 3511356 CT-TCTGGGCCTTGACGGTC----TGACGGCCACGGCCCTC---CTTTTCATATCTCTCG 3511305
Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGA-CACCTGGCGGGACA 222003
|||||| | ||||| || ||||| | || |||| ||||| | | | ||| ||
Sbjct 3511304 TAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGG-CA 3511246
Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063
| ||| |||| | || ||| | | ||| | || |||||| | ||| ||| ||||||
Sbjct 3511245 GAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACAT 3511186
Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123
|| | || || || | || || || ||| ||||| ||| || || |||| |||
Sbjct 3511185 AGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAA 3511126
Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183
|| ||||| | ||||||||||| |||||||| |||| ||| | ||| || ||||||||
Sbjct 3511125 GAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTT 3511066
Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAG 222243
|||||| ||||| || || | || | |||||| | || | | || | ||
Sbjct 3511065 GTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAG 3511006
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGC 222303
|| || ||| || || || || |||||| | || || | | | |||
Sbjct 3511005 CCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGC 3510946
Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363
| | ||||| ||||| ||| || ||||||||||| ||| ||||||| |||||
Sbjct 3510945 ATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATA 3510886
Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT-GAGATT 222422
||||||||| || || ||||| | || | || || || || |||| || | | |
Sbjct 3510885 GATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTG 3510826
Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482
|||| | | ||| || || |||||||| || || |||||| | | ||||| |
Sbjct 3510825 TGGT-GTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAA 3510767
Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATGGCGCATCT 222540
| | ||| ||||| | | | | || | ||| ||||| || | || | | || |
Sbjct 3510766 GGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAACA-GCCACA-CG 3510709
Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGAC--CCTTGGAGCTGGAGAGCAGGTACGAT 222598
||| ||||| ||| || | || | ||| |||| | | |||||||| ||
Sbjct 3510708 CATAATCATGTGCTGTGGTCGTTCGGC--GACTTGCTTGCCGATTTTCAGCAGGTATGAC 3510651
Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658
|| |||| |||||||| |||||||| | | || ||||| ||| ||| || | |||
Sbjct 3510650 TTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGTCGTAGACAATGGCC 3510591
Query 222659 GCGTCCA 222665
| || ||
Sbjct 3510590 GAGTTCA 3510584
>seq6
Length=3486194
Score = 84.2 bits (92), Expect = 4e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938
|| ||||| || || || || || ||||| ||||| || || || ||||| || ||
Sbjct 2268549 CGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATTTGCTGCGATT 2268608
Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
|||||||||||| ||||| ||||| || || |||||| || || ||||||
Sbjct 2268609 TTCTGGCTCAAGAGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGAACTCATCTCT 2268668
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037
| || ||||| | |||| ||||||||| ||||| |||
Sbjct 2268669 CGTGATGAGGGCATGCACACAGATTTTGCATGCCTCCTC 2268707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844649062720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |