Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 150 5e-31 seq2 93.3 1e-13 >seq4 Length=4310093 Score = 150 bits (166), Expect = 5e-31 Identities = 562/864 (65%), Gaps = 29/864 (3%) Strand=Plus/Minus Query 155592 GACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACAGCA 155650 || |||| ||| || || ||| ||| | || || | || | || || ||||| ||| Sbjct 3511535 GAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAG-TGAACTCGACGATCTCGGTGCA 3511477 Query 155651 CAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATC 155710 || || || || |||||||| || ||||||||||| || ||||| || ||||| Sbjct 3511476 AAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATC 3511417 Query 155711 CTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAG 155770 |||||| || ||||| || || || ||||| |||| || || |||||| ||| || Sbjct 3511416 CTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAG 3511357 Query 155771 GTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGT 155830 | |||| || | || | | ||| ||| |||||| || || ||| Sbjct 3511356 CTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGC-- 3511299 Query 155831 TCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGC 155888 || ||| || || ||||| |||| |||||| || | || ||||| || || Sbjct 3511298 TCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGA 3511239 Query 155889 GACCAAATT-----TTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943 | ||| || || || ||| |||||||||| || | ||| | ||| |||| Sbjct 3511238 GTCCA--TTCCTGGTTCTTCTCGA---CACGCTCCATGAACAAGTCAGGGGTCCACATAG 3511184 Query 155944 CATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002 ||||||| ||||| | | | ||| || || | |||||| ||||| | ||| | ||| Sbjct 3511183 CATAGAACAGGTCAC-GGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAG 3511125 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA---TTCCTC 156059 || || | ||||| || ||||||||| || || |||||| |||| | | Sbjct 3511124 AAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTG 3511065 Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 ||||| ||||| || || || || || || || ||||| |||| | ||||||||| | Sbjct 3511064 TTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGC 3511005 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA--CATTATGAA 156177 ||||| || || ||||| ||||| ||| | || |||| || || | || | | | Sbjct 3511004 CCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCA 3510945 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 | || || || || ||||| | || || || || || ||| | || | Sbjct 3510944 T-TG-AGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCAT 3510887 Query 156238 AAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | || || || || |||||| | || | ||| ||| |||| || | || || Sbjct 3510886 AGATGCCCTCGATGCTATCATCCTTCATGTCGAT-CAAGA-AGCAGGAGGACAGCTGGGG 3510829 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 |||||||||| || ||||| || || |||| |||||| |||| |||| | ||||| Sbjct 3510828 CTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACAT 3510769 Query 156356 ATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCT 156415 | | ||||||||| | ||||||||| || ||||| |||| | || || | Sbjct 3510768 AAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAACAGCCACACG 3510709 Query 156416 CATCCACATATGCTGAGGACGCTC 156439 ||| ||| ||||| || || || Sbjct 3510708 CATAATCATGTGCTGTGGTCGTTC 3510685 >seq2 Length=5161063 Score = 93.3 bits (102), Expect = 1e-13 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490 ||||||| | | | ||| || |||| | ||||| ||||| ||| || || ||| Sbjct 236389 TGGACGCGGAACGGATCTGAGACGTCGAAAAGCCGTTCCTTGAGGAACGCCGAAGCGCCG 236448 Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550 || | |||||| || ||||||||||| || ||||| || | |||||| || || || | | Sbjct 236449 TGAGCAATCATGCAGTCACGCTCCATCTCTCCGAATCGTAAACCACCGTCCCGGGCGCGA 236508 Query 251551 CCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTA 251610 || ||| |||| || || || || | | || ||| || ||| || |||| Sbjct 236509 CCTTCGACAGGTTGGCGCGTCAGGATTTGTGTGGGGCCGCGGGCGCGAGAGTGGATCTTA 236568 Query 251611 TCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || | ||||| ||| | || ||||||||| ||| ||||| | ||||| Sbjct 236569 TCGTCAACCATGTGCCTTAGCCGCTGGTAGTATGTCGGACCCAGGAAGA 236617 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| || ||||| |||||||| || ||| | || || |||||| Sbjct 252724 TCTTCAAGAGCCTTGACTAGTCGACGTTGAATATACCCCGTTTCGGCGGTCTTGACAGCT 252665 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 ||||| || ||||| ||||||| |||| || |||||||| | ||| ||| || Sbjct 252664 GTATCGATGAGACCCTCACGACCGGCCATGGCGTGGAAGAAGAACTCCGTGGGTGTCAGA 252605 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC---GAATCGTCGAACTTG 302748 |||| || ||||| |||||||||| || | || |||| |||| ||| ||| Sbjct 252604 CCCCGAAGGTAGGAGTTCTCAACGAAGCCTCTCG---AGGGCGCAGAATAATCGTCCTTT 252548 Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 |||||||| || || | | | || ||||| | || ||||| || || || || Sbjct 252547 GTAAAGTGAGGGAGACTGCGATACTTGAAGCCGAAGGGAATACGTTTCCCTTCCAC 252492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817354850381