Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 150 5e-31
seq2 93.3 1e-13
>seq4
Length=4310093
Score = 150 bits (166), Expect = 5e-31
Identities = 562/864 (65%), Gaps = 29/864 (3%)
Strand=Plus/Minus
Query 155592 GACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACAGCA 155650
|| |||| ||| || || ||| ||| | || || | || | || || ||||| |||
Sbjct 3511535 GAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAG-TGAACTCGACGATCTCGGTGCA 3511477
Query 155651 CAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATC 155710
|| || || || |||||||| || ||||||||||| || ||||| || |||||
Sbjct 3511476 AAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATC 3511417
Query 155711 CTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAG 155770
|||||| || ||||| || || || ||||| |||| || || |||||| ||| ||
Sbjct 3511416 CTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAG 3511357
Query 155771 GTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGT 155830
| |||| || | || | | ||| ||| |||||| || || |||
Sbjct 3511356 CTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGC-- 3511299
Query 155831 TCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGC 155888
|| ||| || || ||||| |||| |||||| || | || ||||| || ||
Sbjct 3511298 TCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGA 3511239
Query 155889 GACCAAATT-----TTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943
| ||| || || || ||| |||||||||| || | ||| | ||| ||||
Sbjct 3511238 GTCCA--TTCCTGGTTCTTCTCGA---CACGCTCCATGAACAAGTCAGGGGTCCACATAG 3511184
Query 155944 CATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002
||||||| ||||| | | | ||| || || | |||||| ||||| | ||| | |||
Sbjct 3511183 CATAGAACAGGTCAC-GGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAG 3511125
Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA---TTCCTC 156059
|| || | ||||| || ||||||||| || || |||||| |||| | |
Sbjct 3511124 AAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTG 3511065
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
||||| ||||| || || || || || || || ||||| |||| | ||||||||| |
Sbjct 3511064 TTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGC 3511005
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAA--CATTATGAA 156177
||||| || || ||||| ||||| ||| | || |||| || || | || | | |
Sbjct 3511004 CCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCA 3510945
Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237
| || || || || ||||| | || || || || || ||| | || |
Sbjct 3510944 T-TG-AGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCAT 3510887
Query 156238 AAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATAGCACGAACTTAATTGAGG 156295
| || || || || |||||| | || | ||| ||| |||| || | || ||
Sbjct 3510886 AGATGCCCTCGATGCTATCATCCTTCATGTCGAT-CAAGA-AGCAGGAGGACAGCTGGGG 3510829
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|||||||||| || ||||| || || |||| |||||| |||| |||| | |||||
Sbjct 3510828 CTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACAT 3510769
Query 156356 ATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCT 156415
| | ||||||||| | ||||||||| || ||||| |||| | || || |
Sbjct 3510768 AAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAACAGCCACACG 3510709
Query 156416 CATCCACATATGCTGAGGACGCTC 156439
||| ||| ||||| || || ||
Sbjct 3510708 CATAATCATGTGCTGTGGTCGTTC 3510685
>seq2
Length=5161063
Score = 93.3 bits (102), Expect = 1e-13
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490
||||||| | | | ||| || |||| | ||||| ||||| ||| || || |||
Sbjct 236389 TGGACGCGGAACGGATCTGAGACGTCGAAAAGCCGTTCCTTGAGGAACGCCGAAGCGCCG 236448
Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550
|| | |||||| || ||||||||||| || ||||| || | |||||| || || || | |
Sbjct 236449 TGAGCAATCATGCAGTCACGCTCCATCTCTCCGAATCGTAAACCACCGTCCCGGGCGCGA 236508
Query 251551 CCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTA 251610
|| ||| |||| || || || || | | || ||| || ||| || ||||
Sbjct 236509 CCTTCGACAGGTTGGCGCGTCAGGATTTGTGTGGGGCCGCGGGCGCGAGAGTGGATCTTA 236568
Query 251611 TCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659
|| | ||||| ||| | || ||||||||| ||| ||||| | |||||
Sbjct 236569 TCGTCAACCATGTGCCTTAGCCGCTGGTAGTATGTCGGACCCAGGAAGA 236617
Score = 93.3 bits (102), Expect = 1e-13
Identities = 163/236 (69%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||| | | ||||| || ||||| |||||||| || ||| | || || ||||||
Sbjct 252724 TCTTCAAGAGCCTTGACTAGTCGACGTTGAATATACCCCGTTTCGGCGGTCTTGACAGCT 252665
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
||||| || ||||| ||||||| |||| || |||||||| | ||| ||| ||
Sbjct 252664 GTATCGATGAGACCCTCACGACCGGCCATGGCGTGGAAGAAGAACTCCGTGGGTGTCAGA 252605
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC---GAATCGTCGAACTTG 302748
|||| || ||||| |||||||||| || | || |||| |||| ||| |||
Sbjct 252604 CCCCGAAGGTAGGAGTTCTCAACGAAGCCTCTCG---AGGGCGCAGAATAATCGTCCTTT 252548
Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
|||||||| || || | | | || ||||| | || ||||| || || || ||
Sbjct 252547 GTAAAGTGAGGGAGACTGCGATACTTGAAGCCGAAGGGAATACGTTTCCCTTCCAC 252492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817354850381
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |