Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 4e-16
seq3 95.1 2e-13
seq2 95.1 2e-13
seq6 91.5 2e-12
>seq4
Length=4310093
Score = 104 bits (114), Expect = 4e-16
Identities = 183/267 (69%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| ||||||||| ||||| ||||| | ||| || || || | ||| || | || || ||
Sbjct 3511059 GCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATT 3511000
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
|| || || || || || | ||||| ||| | || || | ||| || |
Sbjct 3510999 TGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAG 3510940
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|||||||| || || | ||||||||| | || || | || || || || ||||||||
Sbjct 3510939 ACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCC 3510880
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
|||||| || |||||||||| | || ||||| || || || || | | ||
Sbjct 3510879 CTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGT 3510820
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGC 2073803
|||||||||||||||||||| | |||
Sbjct 3510819 TCCGGCATTGAAGAGCGTGGGTGACGC 3510793
Score = 93.3 bits (102), Expect = 7e-13
Identities = 287/446 (64%), Gaps = 12/446 (3%)
Strand=Plus/Minus
Query 2071573 AACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGT 2071630
|||| ||||| ||||||||| || || | | ||| ||||||||| ||||| |||||
Sbjct 3511496 AACTCGACGATCTCGGTGCAAAGATTTGAG--CTTCGAATGGTGCCCAAGTTCTTCTGGT 3511439
Query 2071631 TGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCG 2071690
|||| || |||| ||| ||||||| ||||||||||| | ||| |||||| |||| |
Sbjct 3511438 TGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAG 3511379
Query 2071691 CCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGA-GGTC---CTCGCGCGGCCC 2071746
|| | || || |||| | || |||| || |||| | | ||||||
Sbjct 3511378 CCTCAAGAATCGCATACCACA----GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCC 3511323
Query 2071747 TNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCG 2071806
| |||| | | ||| | |||||| | || ||| ||
Sbjct 3511322 TCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCT 3511263
Query 2071807 GGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAAC 2071866
|| || || ||||| || || | ||| || | || | || || ||| |||
Sbjct 3511262 GGTGCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAAC 3511203
Query 2071867 AGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGG 2071926
| ||| ||||||| | || || || || || || ||| || ||||||||||||
Sbjct 3511202 AAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGG 3511143
Query 2071927 TTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCA 2071986
|||||| | || | | |||| | || || |||||||| |||||||||||| ||||
Sbjct 3511142 TTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 3511083
Query 2071987 AAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|| || || |||||| ||||||
Sbjct 3511082 AAAGCACCAGGTCGCTTGTTGCCGCC 3511057
>seq3
Length=4945454
Score = 95.1 bits (104), Expect = 2e-13
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||||||||| || || || |||||||| ||| |||| |||||||| |||
Sbjct 3847103 GTACTTGGTGACGGCCTTTGTCCCTTCAGAGACGGCATGCTTGGCAAGTTCGCCAGGCAG 3847162
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
|||||| | || | |||||||||||| ||||
Sbjct 3847163 GATCAGTCTGACCGAGGTCTGGATCTCTCGGG 3847194
>seq2
Length=5161063
Score = 95.1 bits (104), Expect = 2e-13
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| || ||| | |||||||| || ||||| ||||| |||||| | || || || | ||
Sbjct 2937222 CTGTTCGAGATCATCCTCGCGGCAAACTATCTCGATATCAAGGCTCTTCTGGACGTTGGC 2937281
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||||||| || || ||| | |||||||| || ||||||||||| ||||| || || ||
Sbjct 2937282 TGCAAGACAGTTGCGAACATGATCAAGGGGAAATCGCCCGAGGAGATCCGGAAAACTTTC 2937341
Query 2035749 AACAT 2035753
|| ||
Sbjct 2937342 AATAT 2937346
>seq6
Length=3486194
Score = 91.5 bits (100), Expect = 2e-12
Identities = 204/304 (67%), Gaps = 7/304 (2%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| || || ||| ||| | ||| || |||| ||| || ||||| ||||| ||
Sbjct 2268679 CCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCAGGCATCAGGCCCTTGCTC 2268620
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAA--AGATGCCCTCGACGGCGGCAA 794458
|||||||| || || ||| | || || | |||||| |||| ||||||||||| || |
Sbjct 2268619 TTGAGCCAGAAAATCGCA--GCAAATGATCCAGAAAAGAAGATACCCTCGACGGCTGCGA 2268562
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518
| | || || || | || |||||| | ||| | |||||| | | ||||
Sbjct 2268561 AAGCAACCAGTCGTTGAGCGAAAGTGGACT---CCTTATCAGAGATCCATCTAAGAGCCC 2268505
Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578
| || ||||| || | | | || | |||||||| || || |||| | |||||
Sbjct 2268504 AGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCGAACAGGTAGGTCTTCT 2268445
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
| || || | ||||| |||||||||||||| || || |||| ||||||||||| |
Sbjct 2268444 CTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATCTCGGAGTGGATGTTCT 2268385
Query 794639 CGAT 794642
| ||
Sbjct 2268384 CCAT 2268381
Score = 87.8 bits (96), Expect = 3e-11
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078
|||| ||||||||||| || |||||||||||||||||||| || ||||||||| |
Sbjct 2268874 AGCAACCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGAGTTCATGCCCAGC 2268815
Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATG 794138
| | || || |||| || | | ||||||||| || || |||| || |||||||||
Sbjct 2268814 AAACCGACAGGGAGCGCTTCAGTTAGAAACTCTTTTTCAATAGCGACTGCTTCGATGATG 2268755
Query 794139 A 794139
|
Sbjct 2268754 A 2268754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245017130707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |