Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 5e-23
>seq5
Length=3889323
Score = 123 bits (136), Expect = 5e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || ||||| || ||||| || ||||| || || || || | | ||
Sbjct 1366563 ACGGAGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCC 1366504
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| ||||| |||||||||||||| || | ||| ||||| ||||| || || |||||
Sbjct 1366503 GTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTT 1366444
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
||||| ||| ||||| || || || || || ||||| | | || || || | || |
Sbjct 1366443 GTCTTGGATC-TTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCGACCTCAAGGGTGA 1366385
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || | ||||| || || || |||||
Sbjct 1366384 TGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981827036464407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |