Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 147 2e-30 seq5 140 3e-28 seq1 109 5e-19 >seq4 Length=4310093 Score = 147 bits (162), Expect = 2e-30 Identities = 1091/1746 (62%), Gaps = 41/1746 (2%) Strand=Plus/Minus Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGC 148106 || || || ||| |||||| ||||| ||||| || || || ||||| | | || | | Sbjct 3512321 TTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGA-TAGT 3512263 Query 148107 T--TTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGT 148164 | || || || |||||| | ||||||||||| |||||| | | || ||| | Sbjct 3512262 TCGTTGGCTG-ATTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATGTTGG 3512204 Query 148165 CGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATA 148224 |||| ||| ||||| || | || || | || | || ||| | || | | | Sbjct 3512203 GGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGACCAGA 3512144 Query 148225 GGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGA 148284 | || |||| ||| || | | || || | || || ||||| ||||| || || | Sbjct 3512143 GACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACCAGCCA 3512084 Query 148285 GCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAA 148344 | || || || || | |||| ||| | || ||||| | ||||||||||| | || Sbjct 3512083 GGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAA 3512024 Query 148345 TCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGAT 148404 |||| | ||| | || || ||||| || || || || |||||||| | ||| | Sbjct 3512023 TCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCATACT 3511964 Query 148405 TTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACA 148464 | || | | ||||| || |||||||||| || || || || || ||||||| Sbjct 3511963 TGGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGTCAGATGGGGTGACATTCCACA 3511904 Query 148465 TGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524 |||| ||||| || ||||| | | |||||||||||||||| || | || | Sbjct 3511903 TGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATGTGCCTT 3511844 Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584 || || || || ||||| || ||| || | | ||| || ||||| || | Sbjct 3511843 GCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAAAGATCT 3511784 Query 148585 GCCTGTTGA---GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACG 148641 | |||||| | | ||| ||| | || | || | |||||| | || | Sbjct 3511783 GGATGTTGAGTTGTCGAGCCTCCGGAGAG---TCAAAGGGAAGACGCAGAGCAAGGAAGG 3511727 Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701 | || ||||| || || || || | |||||| || || || || || || Sbjct 3511726 CATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTTCTTCG 3511667 Query 148702 CGCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760 | ||| || ||||||| |||| ||||||||| |||| | |||||| ||||| Sbjct 3511666 C-CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGTGACCACT 3511608 Query 148761 TTTGT-AATTC-----TGCGCAGCAATTCAAAATCG-TACTTG--TCATCTACGATGCAT 148811 | || | || ||| || ||| | ||| || | | || |||| | | Sbjct 3511607 TGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGACGAAG-GT 3511549 Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871 || | ||| | || || | |||||| || || ||| || || || || |||| Sbjct 3511548 GGG--AAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAACTCG 3511491 Query 148872 ACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931 |||||||||| ||| ||||| || | || ||||| |||||| || |||||||| Sbjct 3511490 ACGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTC 3511431 Query 148932 CTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACT 148991 |||||||| || |||||||| |||||||| || || || || ||| | || Sbjct 3511430 CTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTC---- 3511375 Query 148992 ATGAACCG-AT---GCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTC 149047 | ||| || || ||| | ||| || || ||| | || ||||||| || Sbjct 3511374 AAGAATCGCATACCACAGCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTC 3511315 Query 149048 GTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107 ||| || ||| || ||| | ||||||||| ||| | || || || | Sbjct 3511314 ATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTC 3511255 Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167 || ||||| | || | ||| | || | | || |||| ||| |||| || || Sbjct 3511254 ATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGG 3511195 Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227 ||| | || || | ||||| || || | ||||| ||| ||| | Sbjct 3511194 GGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCT 3511135 Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287 || || | | | || | || |||||||| ||||| | ||| | || | || || Sbjct 3511134 TAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACC 3511075 Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344 ||| ||||||||||||||||||| ||| || | ||||| || || || | ||| Sbjct 3511074 AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACAT 3511015 Query 149345 AGGTTCAATG---CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCG 149401 ||| |||| ||| | | || || ||||| |||| ||| || || Sbjct 3511014 AGG---AATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACG 3510958 Query 149402 CACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCC 149461 | ||| | |||| |||||||| || || ||| ||||| || ||| Sbjct 3510957 GATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTT 3510898 Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCA 149521 ||| || ||||||||||||||||| || ||||||| | || ||||| ||| | Sbjct 3510897 GAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGA 3510838 Query 149522 CATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT 149581 || || || | || ||||| ||| | ||||| || || ||||| | || Sbjct 3510837 CAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTT 3510778 Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTAT 149641 |||| ||| | | ||| | ||| | || || || || || ||||| || | Sbjct 3510777 CTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAAC 3510718 Query 149642 GGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA 149701 || || ||||| | ||| ||||| ||||| || || |||| || || ||||| |||| Sbjct 3510717 AGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGCCGATTTTCAGCAG 3510658 Query 149702 GTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTC 149761 ||| || || | |||||| | |||||||| | ||||| ||||| | | ||| | | Sbjct 3510657 GTATGACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGTCGTAGAC 3510598 Query 149762 AATGGC 149767 |||||| Sbjct 3510597 AATGGC 3510592 >seq5 Length=3889323 Score = 140 bits (154), Expect = 3e-28 Identities = 152/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||||| || ||| | | | ||||||||||| || || Sbjct 1366316 GTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCA-TCCTCGAGCTGTTTACC 1366258 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||| || ||||| |||||||||||||| |||||| ||| Sbjct 1366257 AGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 1366198 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || || | ||||| || |||||||| || || Sbjct 1366197 GACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGT 1366138 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 1366137 CTTGACGAAGATCTGCATG 1366119 Score = 111 bits (122), Expect = 2e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| || ||||| ||| || ||| || || || || ||||||||||| ||| Sbjct 1366995 CTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCG--TCTTCAAGCTGCTTGCCGGCG 1366938 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | || | | |||||||||||| |||||||| |||||||| |||||| ||||| Sbjct 1366937 AAGATCAATCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACA 1366878 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | |||| ||||| | | ||| || || | || | ||| |||||||||| || || Sbjct 1366877 TTGTCAATGGTGTCTGAGCTCTCAACTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTG 1366818 Query 133647 ACGAAAATCTGCAT 133660 ||||| |||||||| Sbjct 1366817 ACGAAGATCTGCAT 1366804 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514 ||| | |||||| || ||||| || ||||| || | ||| || || ||||| ||| Sbjct 1366779 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCG--TCCTCAAGC 1366722 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || | |||||||||||||| ||||| || |||||||| ||| Sbjct 1366721 TGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTC-TTGAAT 1366663 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| | ||||| | |||| || || | || || || || | |||| || ||||| Sbjct 1366662 TTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTGCC 1366603 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||| || |||||| Sbjct 1366602 CGTGAGGGTCTTCACGAAGATTTGCATG 1366575 >seq1 Length=6061779 Score = 109 bits (120), Expect = 5e-19 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCGTAAA 133530 || || |||||||| |||| || ||| ||| ||| ||||| |||||||| ||| | | Sbjct 4126221 TTTTGGATATTGTAGTCGCTCAACGT--ACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 4126278 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | || |||||||||||||| |||||||| |||||||| |||||| |||| | | Sbjct 4126279 TCAGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 4126338 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | ||||| | || || || |||| ||||| ||| ||||| || || || || |||| Sbjct 4126339 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 4126398 Query 133651 A 133651 | Sbjct 4126399 A 4126399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420721444120