Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 147 2e-30
seq5 140 3e-28
seq1 109 5e-19
>seq4
Length=4310093
Score = 147 bits (162), Expect = 2e-30
Identities = 1091/1746 (62%), Gaps = 41/1746 (2%)
Strand=Plus/Minus
Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGC 148106
|| || || ||| |||||| ||||| ||||| || || || ||||| | | || | |
Sbjct 3512321 TTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGA-TAGT 3512263
Query 148107 T--TTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGT 148164
| || || || |||||| | ||||||||||| |||||| | | || ||| |
Sbjct 3512262 TCGTTGGCTG-ATTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATGTTGG 3512204
Query 148165 CGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATA 148224
|||| ||| ||||| || | || || | || | || ||| | || | | |
Sbjct 3512203 GGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGACCAGA 3512144
Query 148225 GGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGA 148284
| || |||| ||| || | | || || | || || ||||| ||||| || || |
Sbjct 3512143 GACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACCAGCCA 3512084
Query 148285 GCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAA 148344
| || || || || | |||| ||| | || ||||| | ||||||||||| | ||
Sbjct 3512083 GGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAA 3512024
Query 148345 TCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGAT 148404
|||| | ||| | || || ||||| || || || || |||||||| | ||| |
Sbjct 3512023 TCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCATACT 3511964
Query 148405 TTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACA 148464
| || | | ||||| || |||||||||| || || || || || |||||||
Sbjct 3511963 TGGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGTCAGATGGGGTGACATTCCACA 3511904
Query 148465 TGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524
|||| ||||| || ||||| | | |||||||||||||||| || | || |
Sbjct 3511903 TGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATGTGCCTT 3511844
Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584
|| || || || ||||| || ||| || | | ||| || ||||| || |
Sbjct 3511843 GCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAAAGATCT 3511784
Query 148585 GCCTGTTGA---GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACG 148641
| |||||| | | ||| ||| | || | || | |||||| | || |
Sbjct 3511783 GGATGTTGAGTTGTCGAGCCTCCGGAGAG---TCAAAGGGAAGACGCAGAGCAAGGAAGG 3511727
Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701
| || ||||| || || || || | |||||| || || || || || ||
Sbjct 3511726 CATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTTCTTCG 3511667
Query 148702 CGCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760
| ||| || ||||||| |||| ||||||||| |||| | |||||| |||||
Sbjct 3511666 C-CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGTGACCACT 3511608
Query 148761 TTTGT-AATTC-----TGCGCAGCAATTCAAAATCG-TACTTG--TCATCTACGATGCAT 148811
| || | || ||| || ||| | ||| || | | || |||| | |
Sbjct 3511607 TGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGACGAAG-GT 3511549
Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871
|| | ||| | || || | |||||| || || ||| || || || || ||||
Sbjct 3511548 GGG--AAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAACTCG 3511491
Query 148872 ACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931
|||||||||| ||| ||||| || | || ||||| |||||| || ||||||||
Sbjct 3511490 ACGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTC 3511431
Query 148932 CTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACT 148991
|||||||| || |||||||| |||||||| || || || || ||| | ||
Sbjct 3511430 CTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTC---- 3511375
Query 148992 ATGAACCG-AT---GCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTC 149047
| ||| || || ||| | ||| || || ||| | || ||||||| ||
Sbjct 3511374 AAGAATCGCATACCACAGCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTC 3511315
Query 149048 GTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107
||| || ||| || ||| | ||||||||| ||| | || || || |
Sbjct 3511314 ATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTC 3511255
Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167
|| ||||| | || | ||| | || | | || |||| ||| |||| || ||
Sbjct 3511254 ATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGG 3511195
Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227
||| | || || | ||||| || || | ||||| ||| ||| |
Sbjct 3511194 GGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCT 3511135
Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287
|| || | | | || | || |||||||| ||||| | ||| | || | || ||
Sbjct 3511134 TAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACC 3511075
Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344
||| ||||||||||||||||||| ||| || | ||||| || || || | |||
Sbjct 3511074 AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACAT 3511015
Query 149345 AGGTTCAATG---CCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCG 149401
||| |||| ||| | | || || ||||| |||| ||| || ||
Sbjct 3511014 AGG---AATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACG 3510958
Query 149402 CACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCC 149461
| ||| | |||| |||||||| || || ||| ||||| || |||
Sbjct 3510957 GATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTT 3510898
Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCA 149521
||| || ||||||||||||||||| || ||||||| | || ||||| ||| |
Sbjct 3510897 GAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGA 3510838
Query 149522 CATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT 149581
|| || || | || ||||| ||| | ||||| || || ||||| | ||
Sbjct 3510837 CAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTT 3510778
Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTAT 149641
|||| ||| | | ||| | ||| | || || || || || ||||| || |
Sbjct 3510777 CTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGATACCAAC 3510718
Query 149642 GGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA 149701
|| || ||||| | ||| ||||| ||||| || || |||| || || ||||| ||||
Sbjct 3510717 AGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGCCGATTTTCAGCAG 3510658
Query 149702 GTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTC 149761
||| || || | |||||| | |||||||| | ||||| ||||| | | ||| | |
Sbjct 3510657 GTATGACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGTCGTAGAC 3510598
Query 149762 AATGGC 149767
||||||
Sbjct 3510597 AATGGC 3510592
>seq5
Length=3889323
Score = 140 bits (154), Expect = 3e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||||||||| || |||||||||| || ||| | | | ||||||||||| || ||
Sbjct 1366316 GTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCA-TCCTCGAGCTGTTTACC 1366258
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| |||||||| || ||||| |||||||||||||| |||||| |||
Sbjct 1366257 AGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTT 1366198
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||| | | ||| || || | ||||| || |||||||| || ||
Sbjct 1366197 GACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGT 1366138
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 1366137 CTTGACGAAGATCTGCATG 1366119
Score = 111 bits (122), Expect = 2e-19
Identities = 142/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCG 133526
||| ||||| || ||||| ||| || ||| || || || || ||||||||||| |||
Sbjct 1366995 CTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCG--TCTTCAAGCTGCTTGCCGGCG 1366938
Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586
| || | | |||||||||||| |||||||| |||||||| |||||| |||||
Sbjct 1366937 AAGATCAATCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACA 1366878
Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646
| |||| ||||| | | ||| || || | || | ||| |||||||||| || ||
Sbjct 1366877 TTGTCAATGGTGTCTGAGCTCTCAACTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTG 1366818
Query 133647 ACGAAAATCTGCAT 133660
||||| ||||||||
Sbjct 1366817 ACGAAGATCTGCAT 1366804
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/208 (72%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514
||| | |||||| || ||||| || ||||| || | ||| || || ||||| |||
Sbjct 1366779 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCG--TCCTCAAGC 1366722
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| ||| | || | |||||||||||||| ||||| || |||||||| |||
Sbjct 1366721 TGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTC-TTGAAT 1366663
Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| | ||||| | |||| || || | || || || || | |||| || |||||
Sbjct 1366662 TTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTGCC 1366603
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || || ||||| || ||||||
Sbjct 1366602 CGTGAGGGTCTTCACGAAGATTTGCATG 1366575
>seq1
Length=6061779
Score = 109 bits (120), Expect = 5e-19
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCGTAAA 133530
|| || |||||||| |||| || ||| ||| ||| ||||| |||||||| ||| | |
Sbjct 4126221 TTTTGGATATTGTAGTCGCTCAACGT--ACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 4126278
Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590
| || |||||||||||||| |||||||| |||||||| |||||| |||| | |
Sbjct 4126279 TCAGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 4126338
Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650
| | ||||| | || || || |||| ||||| ||| ||||| || || || || ||||
Sbjct 4126339 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 4126398
Query 133651 A 133651
|
Sbjct 4126399 A 4126399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420721444120
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