Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 143 3e-29 seq5 96.9 3e-15 >seq4 Length=4310093 Score = 143 bits (158), Expect = 3e-29 Identities = 966/1536 (63%), Gaps = 37/1536 (2%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || ||||| || ||||| ||||| | | || | ||| ||| | ||| Sbjct 3512108 TTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGC 3512049 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| | || || ||||| | || |||| || | ||||||||||| || || Sbjct 3512048 TCAAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACG 3511989 Query 147013 AACAATGAATTTCGCAGACCGTAC---GCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | | || || || | ||| ||| ||| |||| | ||||||||| | ||||||| Sbjct 3511988 AGGAGAGAGTTGCGAACACCATACTTGGCA---ATGTCGGCCTTCAAAGAGTCCCAGTCC 3511932 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 |||| || || || || ||||||||||| |||||||||| ||| | | | || Sbjct 3511931 CACAGGTCAGATGGGGTGACATTCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGG 3511872 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGT-CGCGCTGCGCCAATTCACAGCTTGCCTCGAG 147188 ||||| || |||| || | || | | | || || | || || || ||| Sbjct 3511871 CTGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTT-GCAAGCTCGCACGAAGCAGTGAG 3511813 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTC-- 147246 || ||| ||| ||||| || ||| || |||| || |||| || || Sbjct 3511812 AGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGTT--GTCGAGCCTCCGGAGAG 3511755 Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 || | || | ||||||| | |||||||| || | ||| || | || | ||| ||| Sbjct 3511754 TCAAAGGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATA 3511695 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAAT 147365 |||||||| || || |||||| ||| | | |||||||| |||| || || Sbjct 3511694 GGTCGATGGCGCATATTACTCTTCTTCGC-CTCAGGGACGGGATAGTAGTTGATGTCGAT 3511636 Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425 || ||||| | || || || |||| ||| | | || |||| ||||| Sbjct 3511635 GATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATA 3511576 Query 147426 A--GTCCCGTC-TTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481 | | || || | | ||| | | ||| | ||| | || |||| |||||||| Sbjct 3511575 CTCGCCACGAGATTGGTCGACGAAGG---TGGGA-AGGGCCAGGGAAGCCAAATTGCAGA 3511520 Query 147482 CGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTT 147540 | || ||| || |||| | || ||| ||||| |||| ||| || || || | Sbjct 3511519 CAGCAACCTCGTCTGGCGCAG-TGAACTCGACGATCTCGGTGCAAAGATTTGAGCTTCGA 3511461 Query 147541 ATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTAC 147600 ||| ||||| || | ||| ||||| |||| ||||| || || ||| |||||||||| Sbjct 3511460 ATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAG 3511401 Query 147601 GGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGC 147657 || ||||||||| || | |||| || | ||| ||| | ||| || Sbjct 3511400 GGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCA---CAGCTTCTGGGCCTTG 3511344 Query 147658 ACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717 || ||| || |||||||| ||||| || | |||||| | | || |||||| ||| Sbjct 3511343 ACGGTCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCG 3511284 Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCC 147777 |||||| ||| || || || || | ||| || || | || | ||| | || | Sbjct 3511283 CCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTC 3511224 Query 147778 GCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCT 147837 | || || ||| |||| || || ||||| || || | || || || || Sbjct 3511223 TTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCA 3511164 Query 147838 TTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGC 147897 | || || ||| ||| | | | ||| | | | | ||| || |||||| Sbjct 3511163 CGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGC 3511104 Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGG 147954 || || || | ||||| ||| | ||||| ||||| |||||||||||||| | | Sbjct 3511103 CATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAG 3511044 Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 || || | ||||| || || |||| ||| || || || | | || || || || Sbjct 3511043 CGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTT 3510984 Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCG 148074 || | | ||| || || | ||| | || | || ||||| || || Sbjct 3510983 CCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCG 3510924 Query 148075 TACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 ||| || || || ||| | | | ||| |||||||| |||||||| || | Sbjct 3510923 GTCTTGGAGAT--CATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCAT 3510866 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | | ||| || || || ||| || || | ||||| || ||| | Sbjct 3510865 CCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGA 3510806 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252 | ||||| ||| || ||||| | || || ||| | | || |||||||| | | Sbjct 3510805 GCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCT 3510746 Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312 || || ||||| ||||| || || | || || ||||| | ||||||||||||||||| Sbjct 3510745 TCTCAATATCGTCACCGTGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTT 3510686 Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372 |||| ||||| ||| ||| || || || ||| || || | || ||| ||||||||| Sbjct 3510685 CGGCGACTTGCTTGCCGATTTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGT 3510626 Query 148373 ACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | | ||| | || || ||||| | ||||||| Sbjct 3510625 ATTGGTAGTTGAAGTCCCTGTCGTAGACAATGGCCG 3510590 >seq5 Length=3889323 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || |||||||| ||||||| ||| || ||| |||||||||||||| | Sbjct 1366313 GACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCG 1366254 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| |||||||| || || || || || | Sbjct 1366253 AAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACA 1366194 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| ||| ||| || || | || | || || || || || || || Sbjct 1366193 TTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTG 1366134 Query 132110 ATGAAAATCTGCATGA 132125 | ||| |||||||||| Sbjct 1366133 ACGAAGATCTGCATGA 1366118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611122550680