Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 3e-29
seq5 96.9 3e-15
>seq4
Length=4310093
Score = 143 bits (158), Expect = 3e-29
Identities = 966/1536 (63%), Gaps = 37/1536 (2%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| || || ||||| || ||||| ||||| | | || | ||| ||| | |||
Sbjct 3512108 TTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGC 3512049
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
||||| | || || ||||| | || |||| || | ||||||||||| || ||
Sbjct 3512048 TCAAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACG 3511989
Query 147013 AACAATGAATTTCGCAGACCGTAC---GCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069
| | || || || | ||| ||| ||| |||| | ||||||||| | |||||||
Sbjct 3511988 AGGAGAGAGTTGCGAACACCATACTTGGCA---ATGTCGGCCTTCAAAGAGTCCCAGTCC 3511932
Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129
|||| || || || || ||||||||||| |||||||||| ||| | | | ||
Sbjct 3511931 CACAGGTCAGATGGGGTGACATTCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGG 3511872
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGT-CGCGCTGCGCCAATTCACAGCTTGCCTCGAG 147188
||||| || |||| || | || | | | || || | || || || |||
Sbjct 3511871 CTGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTT-GCAAGCTCGCACGAAGCAGTGAG 3511813
Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTC-- 147246
|| ||| ||| ||||| || ||| || |||| || |||| || ||
Sbjct 3511812 AGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGTT--GTCGAGCCTCCGGAGAG 3511755
Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306
|| | || | ||||||| | |||||||| || | ||| || | || | ||| |||
Sbjct 3511754 TCAAAGGGAAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATA 3511695
Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAAT 147365
|||||||| || || |||||| ||| | | |||||||| |||| || ||
Sbjct 3511694 GGTCGATGGCGCATATTACTCTTCTTCGC-CTCAGGGACGGGATAGTAGTTGATGTCGAT 3511636
Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425
|| ||||| | || || || |||| ||| | | || |||| |||||
Sbjct 3511635 GATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATA 3511576
Query 147426 A--GTCCCGTC-TTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGA 147481
| | || || | | ||| | | ||| | ||| | || |||| ||||||||
Sbjct 3511575 CTCGCCACGAGATTGGTCGACGAAGG---TGGGA-AGGGCCAGGGAAGCCAAATTGCAGA 3511520
Query 147482 CGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTT 147540
| || ||| || |||| | || ||| ||||| |||| ||| || || || |
Sbjct 3511519 CAGCAACCTCGTCTGGCGCAG-TGAACTCGACGATCTCGGTGCAAAGATTTGAGCTTCGA 3511461
Query 147541 ATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTAC 147600
||| ||||| || | ||| ||||| |||| ||||| || || ||| ||||||||||
Sbjct 3511460 ATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAG 3511401
Query 147601 GGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGC 147657
|| ||||||||| || | |||| || | ||| ||| | ||| ||
Sbjct 3511400 GGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCA---CAGCTTCTGGGCCTTG 3511344
Query 147658 ACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717
|| ||| || |||||||| ||||| || | |||||| | | || |||||| |||
Sbjct 3511343 ACGGTCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCG 3511284
Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCC 147777
|||||| ||| || || || || | ||| || || | || | ||| | || |
Sbjct 3511283 CCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTC 3511224
Query 147778 GCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCT 147837
| || || ||| |||| || || ||||| || || | || || || ||
Sbjct 3511223 TTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCA 3511164
Query 147838 TTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGC 147897
| || || ||| ||| | | | ||| | | | | ||| || ||||||
Sbjct 3511163 CGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGC 3511104
Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGG 147954
|| || || | ||||| ||| | ||||| ||||| |||||||||||||| | |
Sbjct 3511103 CATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAG 3511044
Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014
|| || | ||||| || || |||| ||| || || || | | || || || ||
Sbjct 3511043 CGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTT 3510984
Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCG 148074
|| | | ||| || || | ||| | || | || ||||| || ||
Sbjct 3510983 CCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCG 3510924
Query 148075 TACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132
||| || || || ||| | | | ||| |||||||| |||||||| || |
Sbjct 3510923 GTCTTGGAGAT--CATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCAT 3510866
Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192
|| | | | | ||| || || || ||| || || | ||||| || ||| |
Sbjct 3510865 CCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGA 3510806
Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252
| ||||| ||| || ||||| | || || ||| | | || |||||||| | |
Sbjct 3510805 GCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCT 3510746
Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312
|| || ||||| ||||| || || | || || ||||| | |||||||||||||||||
Sbjct 3510745 TCTCAATATCGTCACCGTGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTT 3510686
Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372
|||| ||||| ||| ||| || || || ||| || || | || ||| |||||||||
Sbjct 3510685 CGGCGACTTGCTTGCCGATTTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGT 3510626
Query 148373 ACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
| | ||| | || || ||||| | |||||||
Sbjct 3510625 ATTGGTAGTTGAAGTCCCTGTCGTAGACAATGGCCG 3510590
>seq5
Length=3889323
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || |||||||| ||||||| ||| || ||| |||||||||||||| |
Sbjct 1366313 GACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCG 1366254
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || ||||| ||||| ||||| |||||||| || || || || || |
Sbjct 1366253 AAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACA 1366194
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| ||| ||| || || | || | || || || || || || ||
Sbjct 1366193 TTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTG 1366134
Query 132110 ATGAAAATCTGCATGA 132125
| ||| ||||||||||
Sbjct 1366133 ACGAAGATCTGCATGA 1366118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611122550680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |