Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 2e-23
seq8 95.1 1e-14
>seq5
Length=3889323
Score = 123 bits (136), Expect = 2e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | |||| ||||| || || || |||||||| ||||||||||| |||| |
Sbjct 1367030 CCGCCACGCAGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 1366971
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| |||| || |||||||| || || || ||||| | ||||||||| | ||
Sbjct 1366970 AGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGG 1366911
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686
| || |||||||||| |||||| ||| | | | | | ||||| |||| ||
Sbjct 1366910 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTC---TCA 1366854
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || || || || || ||||| || || || || ||||||||
Sbjct 1366853 ACTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||||||| || ||| || | || || ||||| ||||| || ||
Sbjct 1366311 CTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAA 1366252
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||| || | ||||| || ||||||||| |||||| ||| | | |
Sbjct 1366251 GATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATT 1366192
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||||||||| || ||||| | ||||| || || || || | || || ||
Sbjct 1366191 GTCGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGAC 1366132
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1366131 GAAGATCTGCAT 1366120
Score = 86.0 bits (94), Expect = 6e-12
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | | ||||| |||| || |||||||| || || ||
Sbjct 1366766 TCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 1366707
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664
||||| ||||||||||| | || | | |||||||| | ||| ||| | ||| | ||
Sbjct 1366706 ATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGT-CTTGAATTTTCGACTTGA-CGT 1366649
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | || || ||||| ||||| | |||||| || || ||||| | || ||||
Sbjct 1366648 TGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTGCCCGTGAGGGTCTTCA 1366589
Query 35724 CAAATATCTGCAT 35736
| || || |||||
Sbjct 1366588 CGAAGATTTGCAT 1366576
>seq8
Length=1848290
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 41171 TGTGGATGCGCTCGAGGATCAGCTGCGCGACACGATCACCCTTCATCACCACAAAGTCCA 41230
||| |||||||||||||| ||||||||||| ||||| || | || | || || |
Sbjct 1385398 TGTAGATGCGCTCGAGGACGAGCTGCGCGACGCGATCCCCGCGACTGACGGCGAAATCGA 1385339
Query 41231 CGTCG---TTGTTGTTCACCATCACTATGCCCACGTTGCCCGTGTAGTCGGGATCGATGA 41287
|||| | |||| || || |||| | ||| | ||| |||||||| |||||||
Sbjct 1385338 CGTCCGCATGGTTGAACAGCAACACTTT---CACCTCGCCGCGGTAGTCGGCGTCGATGA 1385282
Query 41288 CGCCAGCAGCAATGTCGATCTTGTGCTTCAACGCCAGCCCCGATCGGGGCGCGATCCTAC 41347
| || || | ||||||| |||||| |||||| ||||| ||||||||||||| |
Sbjct 1385281 CCCCCGCGCCCGTGTCGATGAAGTGCTTGGCCGCCAGGCCCGACCGGGGCGCGATCCGCC 1385222
Query 41348 CGTA 41351
||||
Sbjct 1385221 CGTA 1385218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793526746040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |