Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 120 3e-22 seq4 87.8 2e-12 >seq5 Length=3889323 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||||||||||| || ||||||||||| | || | ||| || Sbjct 1366784 ACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTCA 1366725 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || ||||| |||||||| ||||| || || || || || |||||| Sbjct 1366724 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGA 1366665 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||||| ||| | ||| || || ||||| || || || || || || || Sbjct 1366664 ATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTG 1366605 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| |||||||| Sbjct 1366604 CCCGTGAGGGTCTTCACGAAGATTTGCAT 1366576 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || || || ||||| || ||||||||| | Sbjct 1366574 CCACCACGGAGACGGAGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGAA 1366515 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || || || || || ||||| || | ||| ||||||||||| || Sbjct 1366514 AGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGGA 1366455 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | || ||| ||| || || Sbjct 1366454 ATGCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCGACC 1366395 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | ||| || ||||| |||||||| Sbjct 1366394 TCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| || ||| ||||| | ||| ||||| ||||||||||||||| | || | Sbjct 1367021 AGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGG 1366962 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| || || ||||| | |||||| ||||| || ||||| || Sbjct 1366961 CCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGGATGCCCTCC 1366902 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || || || | ||| Sbjct 1366901 TTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAATGTA 1366842 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || ||||| || ||||| Sbjct 1366841 ATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || || || || || |||||||| |||| Sbjct 1366346 CCACCACGGAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCTC 1366287 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || ||||||||||| || || || || | ||||||||||| || || Sbjct 1366286 AGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGA 1366227 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| ||| | |||||| ||| || || Sbjct 1366226 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACC 1366167 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||| | || || ||||| || ||||| Sbjct 1366166 TCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1366120 >seq4 Length=4310093 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 8247 TCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAA 8306 ||| | ||| ||||||| || |||||||| ||||| || || |||||| || ||||| Sbjct 3511380 TCAGACCGAGACCGGTACTCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAA 3511439 Query 8307 TCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAG 8366 || | ||| ||||||||||| | || ||||| ||| | || || || ||| || Sbjct 3511440 CCAGAAGAACTTGGGCACCATTCGAAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCAC 3511499 Query 8367 CGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 ||||| ||||| || || || |||||| | || || Sbjct 3511500 TGCGCCAGACGAGGTTGCTGTCTGCAATTTGGCTTC 3511535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398317872760