Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 167 3e-36
seq6 113 6e-20
>seq4
Length=4310093
Score = 167 bits (184), Expect = 3e-36
Identities = 566/873 (65%), Gaps = 14/873 (2%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || |||| || | ||| || ||||| |||| ||||| |||||||| || || |
Sbjct 3511460 ATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAG 3511401
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
|||||||| || || |||||| || | ||| | | ||| | | || || |
Sbjct 3511400 GGAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCTTGA-- 3511343
Query 69472 ACGGTCTT---GTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCT 69528
|||||| | ||| ||| ||||||||| || ||| | || |||||
Sbjct 3511342 -CGGTCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCG 3511284
Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588
|| | |||||| ||| ||| || ||||| || || | | | ||| | | |
Sbjct 3511283 CCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTC 3511224
Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGT 69647
| || || || | ||| || | || || |||| | ||| ||| || || || | ||
Sbjct 3511223 TTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGC-ATAGAACAGGTCACGGGC 3511165
Query 69648 TCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATG 69707
| |||||| || || || ||| | |||| | || || | | ||||| ||
Sbjct 3511164 ACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTG 3511105
Query 69708 CCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTA 69767
|||||| || || || || || | | || ||||| || || || ||||| || | |||
Sbjct 3511104 CCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTA 3511045
Query 69768 TCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827
| ||| || || || | || | || ||| ||||| | ||||| ||| | ||||| ||
Sbjct 3511044 GCGGGCCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGT 3510985
Query 69828 TCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCT 69885
||| | ||| || || |||| || || | | || || |||| || || ||
Sbjct 3510984 TCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGA--GACCGATGCCACCA 3510927
Query 69886 GCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCA 69945
|| | || ||||| | ||||| || | ||||||||| || ||||| |||||||||
Sbjct 3510926 GCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCA 3510867
Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005
|| |||||| | | || ||| |||| || | ||| ||||| ||||| ||
Sbjct 3510866 TCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAG 3510807
Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCT 70065
| || || || || ||||| || || || | || | || |||||||| ||||| |
Sbjct 3510806 AGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTC 3510747
Query 70066 GATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124
|| ||||| ||| | || || || | || |||||||| | ||| ||||| |||||
Sbjct 3510746 TTCTCAATATCGTCACCG-TGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTCG 3510688
Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184
||| | || || ||||||| ||||||||| || |||| || || || |||||
Sbjct 3510687 TTCGGCGACTTGCTTGCCGATTTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAA 3510628
Query 70185 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
|| | ||| ||||| || ||||| | |||
Sbjct 3510627 GTATTGGTAGTTGAAGTCCCTGTCGTAGACAAT 3510595
>seq6
Length=3486194
Score = 113 bits (124), Expect = 6e-20
Identities = 206/301 (68%), Gaps = 3/301 (1%)
Strand=Plus/Minus
Query 39637 GCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTT 39696
||||||||| | | || | ||| || ||||| ||||| |||||||| || || |
Sbjct 2268680 GCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCAGGCATCAGGCCCTTGCT 2268621
Query 39697 TTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA 39756
|||||||| || || |||||||| ||||||||||||||||| || || || ||||| ||
Sbjct 2268620 CTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATACCCTCGACGGCTGCGAA 2268561
Query 39757 TGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCTGTGCCCAATC 39813
||||| |||| | || || | | || |||| ||||| | | ||||| ||
Sbjct 2268560 AGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAGATCCATCTAAGAGCCCAGTC 2268501
Query 39814 AGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATC 39873
|| ||||| | ||||| || || || ||||||| || || || || || |
Sbjct 2268500 GGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCGAACAGGTAGGTCTTCTCTTT 2268441
Query 39874 ACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAAT 39933
||| | || ||||| || || | || |||||| || || |||||||| || ||
Sbjct 2268440 GGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATCTCGGAGTGGATGTTCTCCAT 2268381
Query 39934 C 39934
|
Sbjct 2268380 C 2268380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908688377320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |