Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq4 228 1e-54
seq6 82.4 1e-10
>seq4
Length=4310093
Score = 228 bits (252), Expect = 1e-54
Identities = 1131/1774 (64%), Gaps = 39/1774 (2%)
Strand=Plus/Minus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
|||||||||| ||| | | ||| | | ||||| |||||||| || || ||||| |
Sbjct 3512446 TGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3512387
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450
| |||||| || | ||||| || | || ||| ||| || || || || |
Sbjct 3512386 CCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCATGGTGGGTTCTTTCAAGT 3512327
Query 110451 AGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGA 110510
|| ||||| ||| ||||| |||||| ||||| | |||||||| | | ||
Sbjct 3512326 GGATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGA 3512267
Query 110511 CA-TCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATA 110569
| | | | || | ||||||| || || || || |||||| || | |||||
Sbjct 3512266 TAGTTCGTTGGCTGA-TTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATG 3512208
Query 110570 TCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGAC 110629
| | ||| ||||| | ||||| || | | || | | |||||| | | |||
Sbjct 3512207 TTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGAC 3512148
Query 110630 CAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCT 110689
|||||||| | | || || || | ||| | |||||| | ||||||||
Sbjct 3512147 CAGAGACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACCA 3512088
Query 110690 GCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCC 110749
|| ||| | | ||||||||| | || ||||| ||||||||||| || || ||
Sbjct 3512087 GCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCA 3512028
Query 110750 AAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCC 110809
| || || | ||| || || || ||||| || || | | ||| ||| |||| |||
Sbjct 3512027 AGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCA 3511968
Query 110810 TTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTT 110867
| || ||| |||| | | |||||||| | | | || | || | || ||
Sbjct 3511967 TACTTGGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGTCAGATGGGGTG-ACATT 3511909
Query 110868 CCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGG 110927
|| |||||||| |||| |||| ||||| || | || ||||| | || ||||| |
Sbjct 3511908 CC-ACATGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATG 3511850
Query 110928 AACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAA 110987
||||| | || | || || || || | || || || ||||| ||||
Sbjct 3511849 TGCCTTGCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAA 3511790
Query 110988 AGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATA 111046
|||| | || | | || || || ||||| | | || ||| | ||
Sbjct 3511789 AGATCTGGATGTTGAGTTGTCGAGCCTCCGGAGAGTCAAAGG-GAAGACGCAGAGCAAGG 3511731
Query 111047 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 111106
|| |||| || ||||||||||| || | |||||||||| || ||||||||| |||
Sbjct 3511730 AAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTTC 3511671
Query 111107 CGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 111163
||| |||| |||||||| | || |||| |||| | ||| | ||| ||
Sbjct 3511670 TTCGC---CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGTG 3511614
Query 111164 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 111223
|| | | |||| |||||||| | | ||| | || | || | |||
Sbjct 3511613 ACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGACG 3511554
Query 111224 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 111283
| | |||||||| | || ||||||||||| ||||| ||| || | ||| ||
Sbjct 3511553 AAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAAC 3511494
Query 111284 TCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 111343
|| | || || || || | || || || ||| || ||||| ||||| ||||| |||
Sbjct 3511493 TCGACGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTC 3511434
Query 111344 TTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTG 111403
||| ||||||| ||||||||||||||||||||||| || || ||||| ||||| | |
Sbjct 3511433 TTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCA 3511374
Query 111404 AGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCT 111461
||||| || | ||| | | || | | || | || | | |||| || |||||| |
Sbjct 3511373 AGAATCGCATACCACAGCTTCTGGGCCTTG-ACGGT-CTGACGGCCACGGCCCTCCTTTT 3511316
Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521
| || | |||||| | | |||||| || || | || | || |||||||| |
Sbjct 3511315 CATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTT 3511256
Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTC 111579
| || |||||||||| ||||| || ||| ||| || |||| |||||| | |||
Sbjct 3511255 CATGAGGGCAGAAAAGAGTCCATT--CCTGGTTCTTCTCGACACGCTCCATGAACAAGTC 3511198
Query 111580 TGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGA 111638
|| |||||| | | || || || | ||| || | ||||| | || |||||
Sbjct 3511197 AGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGA-CTTCTTCCTTGCCGTGGTTCT 3511139
Query 111639 GTCGTA-ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA-- 111695
|| || | |||| ||| || | || ||| |||||||||||||| || |||| || |
Sbjct 3511138 TTCTTAGATTCAA-GAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAA 3511080
Query 111696 ----TAGATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 111750
|| || ||| | | ||||| || | || ||||| || || ||| || ||
Sbjct 3511079 GCACCAGGTCGCTTGTTGCCGCCC----TGGTCGACGTAGCGGGCCGTATTGTTGAAAAC 3511024
Query 111751 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATT 111810
|| | ||| ||||| | |||| |||| ||||| || || ||| || | |
Sbjct 3511023 ACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGT 3510964
Query 111811 GGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACA 111870
|| | | ||| | | || || || ||||| ||| ||||| |||||
Sbjct 3510963 TGCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACA 3510904
Query 111871 CTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA 111930
| | || || ||||||| || | ||| || ||||| || |||| | ||||||
Sbjct 3510903 GGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCA 3510844
Query 111931 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 111990
||||| ||| || |||||| || ||||||||||| || |||| || ||| | ||
Sbjct 3510843 GGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAA 3510784
Query 111991 -CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 112049
|| | |||||||| || ||||||||| | | ||||| || || |||||||
Sbjct 3510783 GCACTTC-TGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGA 3510725
Query 112050 TGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
| || | || || ||||| | ||||| ||||||
Sbjct 3510724 TACCAACAGCCACACGCATAATCATGTGCTGTGG 3510691
>seq6
Length=3486194
Score = 82.4 bits (90), Expect = 1e-10
Identities = 115/159 (72%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | |||||||| || || || ||||||||||| ||| |||||
Sbjct 2268697 GCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCA 2268638
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777
||||| || ||| |||| | ||| |||| || ||| ||||| || || ||||||||
Sbjct 2268637 GGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCA-AATGATCCAGAAAAGAAGAT 2268579
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
|||||| || || || |||| || |||| |||||
Sbjct 2268578 ACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAA 2268540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031897944800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |