Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 seq6 116 5e-21 >seq4 Length=4310093 Score = 260 bits (288), Expect = 2e-64 Identities = 1176/1841 (64%), Gaps = 41/1841 (2%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||||||| | |||| | | |||||||||||||| || || ||||| | Sbjct 3512446 TGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATGCCAGTTTTGAGAC 3512387 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 || |||||| | | ||||| || | | ||| | ||| || || || | Sbjct 3512386 CCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTGCCCATGGTGGGTTCTTTCAAGT 3512327 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || ||||| |||||| || ||||||||| |||||||| |||||||| | | | Sbjct 3512326 GGATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCCCCGATCGGCCGCCATCTGGAGGA 3512267 Query 117985 CA-TCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 | | | | || ||||||||| |||||| |||| || ||| || || | ||||| Sbjct 3512266 TAGTTCGTTGGCT-GATTTCCCAGACAGTCTTGTACAGTGCCTTGATGTCGGCAGGGATG 3512208 Query 118044 TCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 118103 | ||| || || | || ||||| | || || | | |||||| | | |||| Sbjct 3512207 TTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGATACGGTTCTTCATGTTATCTGAC 3512148 Query 118104 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 118163 |||||||| | | ||||||| || ||| | ||||| || |||||||| Sbjct 3512147 CAGAGACCCAGATCGACCAGATCCTTCAAGAGCCACGGGTTGACGACCTGGAACTCACCA 3512088 Query 118164 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 118223 || ||| || | ||||| |||| || |||||||||||||| || ||||| || Sbjct 3512087 GCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCA 3512028 Query 118224 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 118283 | || |||| || || || || ||||| || || | ||| || ||| || | ||| Sbjct 3512027 AGAATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGAGAGAGTTGCGAACACCA 3511968 Query 118284 TTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCT 118341 | | |||| |||| | || |||||||| | || | || || | | Sbjct 3511967 TACTTGGCAATGTCGGCCTTCAAAGAGTCCCAGTCCCACAGGTCAG--ATGGGGTGACAT 3511910 Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401 |||||| ||| ||||||| || ||||| || |||| ||||| | |||||||||| Sbjct 3511909 TCCACATGTCATACTGGAGCATGCCTTGTGAGACTGGGCTGCCCTCGTACGTCTCATATG 3511850 Query 118402 GGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAA 118461 ||| | || || | ||| | || ||| || || || || || || |||| Sbjct 3511849 TGCCTTGCTCCCTTGCAAGCTCGCACGAAGCAGTGAGAGCCGCATGGTAGATGGTCTCAA 3511790 Query 118462 AAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AAAT 118519 | || | || | ||| | ||||| || ||||| | || | ||| | || Sbjct 3511789 AGATCTGGATGTTGAGTTGTC-GAGCCTCCGGAGAGTCAAAGGGAAGAC-GCAGAGCAAG 3511732 Query 118520 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 118579 || |||| || |||||||| || || |||||||| || ||||| | ||||||| ||| Sbjct 3511731 GAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAATAGGTCGATGGCGCATATTACTCTT 3511672 Query 118580 CCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 118636 | || ||| |||||||| | || | ||||| | | || | ||| || Sbjct 3511671 CTTCGC---CTCAGGGACGGGATAGTAGTTGATGTCGATGATTTTGTTCAAATTGCGTGT 3511615 Query 118637 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 118696 ||| || | |||| |||||||| || | ||| | || | || | ||| Sbjct 3511614 GACCACTTGAGTGACCTCATGAAGGCGACCGAAGTCATACTCGCCACGAGATTGGTCGAC 3511555 Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756 | | |||||||| | || |||| ||| || |||| ||| || ||||| | Sbjct 3511554 GAAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGACAGCAACCTCGTCTGGCGCAGTGAA 3511495 Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816 ||| | || || ||||| | ||||| || |||||||||||||||||| || || Sbjct 3511494 CTCGACGATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCT 3511435 Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876 ||| |||| || ||||||||||| |||||||| || || || ||||| || || | || Sbjct 3511434 CTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTC 3511375 Query 118877 GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAG--TGGCGTTGGCTCGCCCCTCTTC 118933 ||||| || | ||| | | || | || | || | || || | | || ||||| | Sbjct 3511374 AAGAATCGCATACCACAGCTTCTGGGCCTTG-ACGGTCTGACG--GCCACGGCCCTCCTT 3511318 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 || || | |||||| | | |||||| || || | | || | || |||||||| Sbjct 3511317 TTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGC 3511258 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 | || |||||||| |||| ||||| || ||| || |||| |||||| | ||| Sbjct 3511257 TTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTC 3511198 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 ||| |||| | || |||| || || || || ||||||| | || || || Sbjct 3511197 AGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTT 3511138 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 | | | ||| ||||| | || ||| |||||||| || |||||||| | || | | Sbjct 3511137 TCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGC 3511078 Query 119174 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227 || | | || || |||||| || || | || || ||| || ||||| Sbjct 3511077 ACC---AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACG 3511021 Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTG 119285 | ||| ||||||| |||| ||| ||||| || || || || ||| | | | Sbjct 3511020 CAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCC--AGTT 3510963 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 || | || |||| | | ||| || || || || ||| ||||| || || Sbjct 3510962 GCACGGATGCAGTGGGCATTGAGACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAG 3510903 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 119405 | |||| || | ||||| || ||||| ||| |||| | |||| | ||||||| Sbjct 3510902 GTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAG 3510843 Query 119406 CTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA- 119464 |||| || ||| ||||| || || |||||||| || |||| ||| || | || Sbjct 3510842 GAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAG 3510783 Query 119465 CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAAT 119524 || | |||||||| || ||| ||||| | | ||| || || ||||| || Sbjct 3510782 CACTTC-TGGGACATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCGTGGAT 3510724 Query 119525 ACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGC 119582 ||| | | || ||||||| ||||| || ||| ||| | | | | | ||| Sbjct 3510723 ACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGC--CGATT 3510666 Query 119583 CTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 || | ||||| ||||||||| ||||||| |||||| || Sbjct 3510665 TTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTA 3510625 >seq6 Length=3486194 Score = 116 bits (128), Expect = 5e-21 Identities = 204/296 (69%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| ||||| |||||||||||||| || ||| ||||| Sbjct 2268697 GCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCA 2268638 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || ||| |||| | ||||||||||||| |||||| ||||| |||||||| Sbjct 2268637 GGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAGATA 2268578 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA--- 130192 ||||| || ||||| |||| || || | ||| || | ||||| ||||| Sbjct 2268577 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAG---TGGACTCCTTATCAGAG 2268521 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| | | ||||| | ||||| || ||| || |||| ||| | ||| || || Sbjct 2268520 ATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCG 2268461 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 || || | |||| ||| ||||| | | ||| | || ||||| |||||| Sbjct 2268460 AACAGGTAGGTCTTCTCTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATA 2268405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435099504280