Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 165 9e-36 seq6 93.3 5e-14 >seq4 Length=4310093 Score = 165 bits (182), Expect = 9e-36 Identities = 1121/1785 (63%), Gaps = 33/1785 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| ||||| | ||||| || || || || ||||| | Sbjct 3510691 CCACAGCACATGATTATGCGTGTGGCTGTTGGTATCCACGGTGACGATATTGAGAAGACC 3510750 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| || |||||||| | || || | ||| || |||| || ||||| Sbjct 3510751 ATTGAGACATACAACCTTATGTCCCA-GAAGTGCTTTACTCATGCGTCACCCACGCTCTT 3510809 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| || |||||| ||||| ||||| |||||| | |||| || ||||| || Sbjct 3510810 CAATGCCGGAACACCACAGCCCCAGCTGTCCTCCTGCTTCTTGATCGACATGAAGGATGA 3510869 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| | || ||||||| || || | | ||||| ||||| ||| ||||| Sbjct 3510870 TAGCATCGAGGGCATCTATGACACACTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 3510929 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || || || | | ||| | | || | | || ||| || || || Sbjct 3510930 TGGCATCGGTCTCAATGCCCACTGCATCCGTGCAACTGGCTCCTACATTGCAGGAACTAA 3510989 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| |||| |||| | ||||| ||| | || || || ||| || || ||||| | Sbjct 3510990 TGGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAACAATACGGCCCGCTACG- 3511048 Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 || | | ||||| | | ||| || || | || |||| || |||||||||| Sbjct 3511049 ---TCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCCATGGC 3511105 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGT-TGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 |||| ||| || | || || ||||| | | | ||||| || | || || | || Sbjct 3511106 ACGCTGATGTCTTTGACTT-CTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAGTCCGT 3511164 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| || || |||| ||| | |||| || || | |||||| || | || ||| || Sbjct 3511165 GCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAG 3511224 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | | ||| |||| || || || | | ||||| || || | |||| | || Sbjct 3511225 AACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGTCTACGGC 3511284 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || |||||| | | || ||| | || || | || || || | | ||| || Sbjct 3511285 GATGAGTTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCAGACCGT- 3511343 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | || | ||||| | || ||||| || |||| |||||||| ||||| || || Sbjct 3511344 CAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACCGAGACCGGTACTCCCTA 3511403 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || ||||| ||| ||||| || || ||||| ||||| || Sbjct 3511404 CATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGCACCATTCG 3511463 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || || ||||| || || || ||| | || || || | ||| ||| ||||| || Sbjct 3511464 AAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGACGAGGTTGCTGTCTG 3511523 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATT 105110 || | || || | || || |||| | || || ||| | | | | ||| | Sbjct 3511524 CAATTTGGCTTCCCTGGCCCTTCCCACCTTCGTCGA-CCAATCTCGTGGCGAGTATGACT 3511582 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | || || || || || || ||||| || | |||| | | || || | Sbjct 3511583 TCGGTCGCCTTCATGAGGTCACTCAAGTGGTCACACGCAATTTGAACAAAATCATCGACA 3511642 Query 105171 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 || | || ||||| |||| || || ||||||| | || || || |||| Sbjct 3511643 TCAACTACTATCCCGTCCCTGAG---GCGAAGAAGAGTAATATGCGCCATCGACCTATTG 3511699 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCC 105286 | || || ||||| ||||| || |||| ||| || || || || | | ||||| || Sbjct 3511700 GCCTTGGGGTTCAAGGTCTTGCAGATGCCTTCCTTGCTCTG-CGTCTTCCCTTTGACTCT 3511758 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 || || || |||| | || ||||||||||| || || || ||||| Sbjct 3511759 CCGGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATCTACCATGCGGCTCTCACT 3511818 Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 || | ||| | ||| || | || ||||||| || | ||||| |||| Sbjct 3511819 GCTTCGTGCGAGCTTGCAAGGGAGCAAGGCACATATGAGACGTACGAGGGCAGCCCAGTC 3511878 Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 105464 |||||||| |||| || | ||| |||| |||| || | || | || | | |||| Sbjct 3511879 TCACAAGGCATGCTCCAGTATGACATGT-GGAATGTCA-CCCCATCTGACCTGTGGGACT 3511936 Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524 |||| || | |||| ||| || | ||| |||| ||| ||||||| | |||| Sbjct 3511937 GGGACTCTTTGAAGGCCGACATTGCCAAGTATGGTGTTCGCAACTCTCTCCTCGTTGCTC 3511996 Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584 | ||||| || || || ||| | || || | || || || ||||||||||| || || | Sbjct 3511997 CTATGCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTTGAGCCATATA 3512056 Query 105585 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATC 105644 | | |||||||| | | ||| || || ||||| | | |||||| | | Sbjct 3512057 CTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCAACCCGTGGC 3512116 Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 105704 || || | || || || | ||||||||||| | | |||||| | | || | Sbjct 3512117 TCTTGAAGGATCTGGTCGATCTGGGTCTCTGGTCAGATAACATGAAGAACCGTATCATCG 3512176 Query 105705 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACC 105764 | |||||||| |||| || || | || || || || ||| ||||| Sbjct 3512177 CCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAGGCACTGTACA 3512236 Query 105765 GCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTCGC 105823 || || ||||||||| || | | | | || | | ||||| || ||||| || | Sbjct 3512237 AGACTGTCTGGGAAATC-AGCCAACGAACTATCCTCCAGATGGCGGCCGATCGGGGCGCC 3512295 Query 105824 TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTC 105883 ||||| || || ||| |||| || | || || || || ||| ||| || Sbjct 3512296 TTCATCGACCAGTCCCAATCCTTGAACATCCACTTGAAAGAACCCACCATGGGCAAAATC 3512355 Query 105884 TCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGA 105943 | || |||||| | | | ||||| | |||||||||||| || ||||| |||||||| Sbjct 3512356 ACATCCATGCACTTTGCCGGCTGGAAAATGGGTCTCAAAACTGGCATGTACTACCTCCGC 3512415 Query 105944 TCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAA 105988 | | ||| | | || |||||||||| | | || | |||| Sbjct 3512416 ACCATGGCCGCTACACAACCCATTCAGTTCACTGTCGACCAAGAA 3512460 >seq6 Length=3486194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 180/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Plus Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761 ||||||| | || || || || ||| | || | || || || | ||||| || || Sbjct 2268444 GAGAAGACCTACCTGTTCGATGCTATCGACACCATCCCTTGCATCCGCAAGAAGGCCGAC 2268503 Query 94762 TGGGCTATGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818 |||||| | | ||| | ||||| |||| || | ||| | ||||| | || Sbjct 2268504 TGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTC---GCTCAACGACTGGTTGCT 2268560 Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAA 94877 || || || |||||||||||||| ||||| || || ||| || |||| |||||||| Sbjct 2268561 TTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATT-TGCTGCGATTTTCTGGCTCAA 2268619 Query 94878 GAAGCGA-GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 | ||| | || || ||||| |||||| ||| || || || || ||||||||||| |||| Sbjct 2268620 G-AGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGAGG 2268678 Query 94937 GACTCCACCAAGAGTTTGC 94955 | | ||| ||| ||||| Sbjct 2268679 GCATGCACACAGATTTTGC 2268697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260705220120