Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 9e-36
seq6 93.3 5e-14
>seq4
Length=4310093
Score = 165 bits (182), Expect = 9e-36
Identities = 1121/1785 (63%), Gaps = 33/1785 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| | ||||| ||||| | ||||| || || || || ||||| |
Sbjct 3510691 CCACAGCACATGATTATGCGTGTGGCTGTTGGTATCCACGGTGACGATATTGAGAAGACC 3510750
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 104340
| ||||||||| || |||||||| | || || | ||| || |||| || |||||
Sbjct 3510751 ATTGAGACATACAACCTTATGTCCCA-GAAGTGCTTTACTCATGCGTCACCCACGCTCTT 3510809
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|||||| || |||||| ||||| ||||| |||||| | |||| || ||||| ||
Sbjct 3510810 CAATGCCGGAACACCACAGCCCCAGCTGTCCTCCTGCTTCTTGATCGACATGAAGGATGA 3510869
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| | || ||||||| || || | | ||||| ||||| ||| |||||
Sbjct 3510870 TAGCATCGAGGGCATCTATGACACACTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 3510929
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|| || || | | ||| | | || | | || ||| || || ||
Sbjct 3510930 TGGCATCGGTCTCAATGCCCACTGCATCCGTGCAACTGGCTCCTACATTGCAGGAACTAA 3510989
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| |||| |||| | ||||| ||| | || || || ||| || || ||||| |
Sbjct 3510990 TGGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAACAATACGGCCCGCTACG- 3511048
Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
|| | | ||||| | | ||| || || | || |||| || ||||||||||
Sbjct 3511049 ---TCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCCATGGC 3511105
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGT-TGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
|||| ||| || | || || ||||| | | | ||||| || | || || | ||
Sbjct 3511106 ACGCTGATGTCTTTGACTT-CTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAGTCCGT 3511164
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| || || |||| ||| | |||| || || | |||||| || | || ||| ||
Sbjct 3511165 GCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAG 3511224
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| | ||| |||| || || || | | ||||| || || | |||| | ||
Sbjct 3511225 AACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGTCTACGGC 3511284
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| |||||| | | || ||| | || || | || || || | | ||| ||
Sbjct 3511285 GATGAGTTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCAGACCGT- 3511343
Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
| || | || | ||||| | || ||||| || |||| |||||||| ||||| || ||
Sbjct 3511344 CAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACCGAGACCGGTACTCCCTA 3511403
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||||| ||||| || ||||| ||| ||||| || || ||||| ||||| ||
Sbjct 3511404 CATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGCACCATTCG 3511463
Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051
|| || ||||| || || || ||| | || || || | ||| ||| ||||| ||
Sbjct 3511464 AAGCTCAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGACGAGGTTGCTGTCTG 3511523
Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATT 105110
|| | || || | || || |||| | || || ||| | | | | ||| |
Sbjct 3511524 CAATTTGGCTTCCCTGGCCCTTCCCACCTTCGTCGA-CCAATCTCGTGGCGAGTATGACT 3511582
Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170
| || || || || || || ||||| || | |||| | | || || |
Sbjct 3511583 TCGGTCGCCTTCATGAGGTCACTCAAGTGGTCACACGCAATTTGAACAAAATCATCGACA 3511642
Query 105171 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
|| | || ||||| |||| || || ||||||| | || || || ||||
Sbjct 3511643 TCAACTACTATCCCGTCCCTGAG---GCGAAGAAGAGTAATATGCGCCATCGACCTATTG 3511699
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCC 105286
| || || ||||| ||||| || |||| ||| || || || || | | ||||| ||
Sbjct 3511700 GCCTTGGGGTTCAAGGTCTTGCAGATGCCTTCCTTGCTCTG-CGTCTTCCCTTTGACTCT 3511758
Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346
|| || || |||| | || ||||||||||| || || || |||||
Sbjct 3511759 CCGGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATCTACCATGCGGCTCTCACT 3511818
Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
|| | ||| | ||| || | || ||||||| || | ||||| ||||
Sbjct 3511819 GCTTCGTGCGAGCTTGCAAGGGAGCAAGGCACATATGAGACGTACGAGGGCAGCCCAGTC 3511878
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 105464
|||||||| |||| || | ||| |||| |||| || | || | || | | ||||
Sbjct 3511879 TCACAAGGCATGCTCCAGTATGACATGT-GGAATGTCA-CCCCATCTGACCTGTGGGACT 3511936
Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524
|||| || | |||| ||| || | ||| |||| ||| ||||||| | ||||
Sbjct 3511937 GGGACTCTTTGAAGGCCGACATTGCCAAGTATGGTGTTCGCAACTCTCTCCTCGTTGCTC 3511996
Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584
| ||||| || || || ||| | || || | || || || ||||||||||| || || |
Sbjct 3511997 CTATGCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTTGAGCCATATA 3512056
Query 105585 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATC 105644
| | |||||||| | | ||| || || ||||| | | |||||| | |
Sbjct 3512057 CTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCAACCCGTGGC 3512116
Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 105704
|| || | || || || | ||||||||||| | | |||||| | | || |
Sbjct 3512117 TCTTGAAGGATCTGGTCGATCTGGGTCTCTGGTCAGATAACATGAAGAACCGTATCATCG 3512176
Query 105705 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACC 105764
| |||||||| |||| || || | || || || || ||| |||||
Sbjct 3512177 CCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAGGCACTGTACA 3512236
Query 105765 GCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTCGC 105823
|| || ||||||||| || | | | | || | | ||||| || ||||| || |
Sbjct 3512237 AGACTGTCTGGGAAATC-AGCCAACGAACTATCCTCCAGATGGCGGCCGATCGGGGCGCC 3512295
Query 105824 TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTC 105883
||||| || || ||| |||| || | || || || || ||| ||| ||
Sbjct 3512296 TTCATCGACCAGTCCCAATCCTTGAACATCCACTTGAAAGAACCCACCATGGGCAAAATC 3512355
Query 105884 TCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGA 105943
| || |||||| | | | ||||| | |||||||||||| || ||||| ||||||||
Sbjct 3512356 ACATCCATGCACTTTGCCGGCTGGAAAATGGGTCTCAAAACTGGCATGTACTACCTCCGC 3512415
Query 105944 TCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGAA 105988
| | ||| | | || |||||||||| | | || | ||||
Sbjct 3512416 ACCATGGCCGCTACACAACCCATTCAGTTCACTGTCGACCAAGAA 3512460
>seq6
Length=3486194
Score = 93.3 bits (102), Expect = 5e-14
Identities = 180/259 (69%), Gaps = 10/259 (4%)
Strand=Plus/Plus
Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761
||||||| | || || || || ||| | || | || || || | ||||| || ||
Sbjct 2268444 GAGAAGACCTACCTGTTCGATGCTATCGACACCATCCCTTGCATCCGCAAGAAGGCCGAC 2268503
Query 94762 TGGGCTATGAAGTGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818
|||||| | | ||| | ||||| |||| || | ||| | ||||| | ||
Sbjct 2268504 TGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTC---GCTCAACGACTGGTTGCT 2268560
Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAA 94877
|| || || |||||||||||||| ||||| || || ||| || |||| ||||||||
Sbjct 2268561 TTCGCAGCCGTCGAGGGTATCTTCTTTTCTGGATCATT-TGCTGCGATTTTCTGGCTCAA 2268619
Query 94878 GAAGCGA-GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936
| ||| | || || ||||| |||||| ||| || || || || ||||||||||| ||||
Sbjct 2268620 G-AGCAAGGGCCTGATGCCTGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGAGG 2268678
Query 94937 GACTCCACCAAGAGTTTGC 94955
| | ||| ||| |||||
Sbjct 2268679 GCATGCACACAGATTTTGC 2268697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260705220120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |