Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4 343 2e-89 >seq4 Length=4310093 Score = 343 bits (380), Expect = 2e-89 Identities = 1140/1744 (65%), Gaps = 43/1744 (2%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| || ||||||||| | ||||| ||| | |||||| | | ||| Sbjct 3512408 TAGTACATGCCAGTTTTGAGACCCATTTTCCAGCCGGCAAAGTGCATGGATGTGATTTTG 3512349 Query 78259 GCCAGACTCGGGTTCTC-CATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACC 78317 ||| | ||||||| || | |||||| | || ||||||||||||||| | || || Sbjct 3512348 CCCATGGT-GGGTTCTTTCAAGTGGATGTTCAAGGATTGGGACTGGTCGATGAAGGCGCC 3512290 Query 78318 GCGGTCGGCCGCCATGTCGATGACCGA-CTTTTGCGGAATCTCCCAGATGGTCCGGTAAA 78376 || ||||||||||| | || || | | || || || | ||||||| ||| ||| | Sbjct 3512289 CCGATCGGCCGCCATCTGGAGGATAGTTCGTTGGCTGATT-TCCCAGACAGTCTTGTACA 3512231 Query 78377 TGGCCTTCAGCTCTTCCTGGATGTCCAGC--GCT-TGTACGCTCCCACCGGCTCGCACAA 78433 ||||| | || | |||||| | | | || || |||||| | | | Sbjct 3512230 GTGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGAACCGAACCACCGTCGGCGATGA 3512171 Query 78434 TTTCATTCTTAATTTGAGGGTTCCAGCGATT--GATCTTCTGAAGATCCCGGACCAGGTG 78491 | ||||| || | | |||| || |||| | |||||| | || Sbjct 3512170 TACGGTTCTTCATGTTATCTGACCAGAGACCCAGATCGACC--AGATCCTTCAAGAGCCA 3512113 Query 78492 CCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTA 78551 | |||| | | |||||| || |||||| || || ||||||||||| || || Sbjct 3512112 CGGGTTGACGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATA 3512053 Query 78552 CGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTG 78610 ||||| ||||| | ||||||| || | ||||||| ||| || ||||| ||||| || | Sbjct 3512052 TGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGGGAGGTTGACGCGGTAGGCATAGGAG 3511994 Query 78611 CGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTA----GGCC--GT 78664 | || || ||||| || |||| ||||| | | || ||| |||| | | || || Sbjct 3511993 CAACGAGGAGAGAGTTGCGAACACCATACTTGGCAATGTCGGCCTTCAAAGAGTCCCAGT 3511934 Query 78665 CCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCG 78724 |||| | ||| | | || ||||||||| || || || || | || | | Sbjct 3511933 CCCACAGGTCAGATGGGGTGACATTCCACATGTCATACTGGAGCATGCCTTGTGAGACTG 3511874 Query 78725 GCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCA 78784 | |||| | ||||||| || | || | |||| | || || ||||| || | | Sbjct 3511873 GGCTGCCCTCGTACGTCTCATATGTGCCTTGCTCCCTTGCAAGCTCGCACGAAGCAGTGA 3511814 Query 78785 GGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGT 78844 | ||||| ||||| | | ||| ||||| ||||||| | || |||| | || Sbjct 3511813 GAGCCGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTGTCGAGCCTCCGGAGAGT 3511754 Query 78845 CGAACGAAAG--GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGAT 78902 | || | ||| || ||||| | |||| |||| || || || || || || | | || Sbjct 3511753 CAAAGGGAAGACGCAGAGCA--AGGAAGGCATCTGCAAGACCTTGAACCCCAAGGCCAAT 3511696 Query 78903 CGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTC--GGTCGGG-TAAAAGTTCCGATC 78959 ||||| |||||||| || ||||| |||||| || |||| || |||| || Sbjct 3511695 AGGTCGATGGCGCATATTACTCTTCTT---CGCCTCAGGGACGGGATAGTAGTTGATGTC 3511639 Query 78960 GATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATC 79019 ||||| ||||| || || ||||| || |||| ||||| | | |||| || Sbjct 3511638 GATGATTTTGTTCAAATTGCGTGTGACCACTTGAGTGACCTCATGAAGGCGACCGAAGTC 3511579 Query 79020 AAAAT------GATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACAC 79073 | | | || | | || ||| || || ||| ||| || |||| ||||| || Sbjct 3511578 ATACTCGCCACGAGATTGGTCGACGAAGGTGGGAAGGGCCAGGGAAGCCAAATTGCAGAC 3511519 Query 79074 GGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGA- 79132 || |||||| || || | ||||| ||| || ||||| | ||| || | | || Sbjct 3511518 AGCAACCTCGTCTGGCGCAGTGAACTCGACGATCTCGGTGCAAAGATTTGA-GCTTCGAA 3511460 Query 79133 TGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACG 79192 ||||||| | ||||||||||||||||||| ||| ||||| ||||||||| |||||| | Sbjct 3511459 TGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGG 3511400 Query 79193 GCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAA 79252 | || |||||||| |||| || |||| | | ||| | | | ||||| ||| Sbjct 3511399 GAGTACCGGTCTCGGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCTTGACGG 3511340 Query 79253 CCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCAT 79312 || | || |||| | || || ||| | ||| || || | || || | Sbjct 3511339 TCTGACGGCCACGGCCCTCCTTTTCATATCTCTCGTAGAGCTCCTTAAACTCATCGCCGT 3511280 Query 79313 AGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCT 79372 ||||||| | ||| || || || || ||||| | || ||| |||| || ||||| Sbjct 3511279 AGACATCAGCCAGTCCTGGTGCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCT 3511220 Query 79373 CAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCA 79432 | || ||||||||| | ||| ||| |||||| || ||| ||||| ||| ||| | Sbjct 3511219 CGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGA 3511160 Query 79433 TCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACG 79492 || || | ||| |||||| | || | | ||||| | || || |||||||| | Sbjct 3511159 CTTCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATG 3511100 Query 79493 GCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGG 79552 ||||||| |||||||| || | ||| |||||| ||||||||||| |||||| |||| Sbjct 3511099 GCTCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGG 3511040 Query 79553 CCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGT 79612 |||| ||||||||||| || | ||| || | || || | | || || || || Sbjct 3511039 CCGTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTG 3510980 Query 79613 TGATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCCGGACCAC 79671 || | || | || || ||| | ||| | || |||||||| || | | Sbjct 3510979 CAATGTAGGAGCCAGTTGCACGGATGCAGTGGGCA-TTGAGACCGATGCCACCAGCGGTC 3510921 Query 79672 TTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTC 79731 |||||||| || || |||||| || || |||||||||||||| || |||||| Sbjct 3510920 TTGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTC 3510861 Query 79732 ATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGT-TCGTACCGGCGTTGAAGAGGGT 79790 || ||| || ||||||| |||| ||| ||| ||| || ||||| |||||||| || Sbjct 3510860 ATGTCGATCAAGAAGCAGGAGGACAGCTG-GGGCTGTGGTGTTCCGGCATTGAAGAGCGT 3510802 Query 79791 CGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGG 79850 || | ||| || || ||| |||| ||| ||| || | ||| ||||| || | Sbjct 3510801 GGGTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTCTC 3510742 Query 79851 GAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCGC 79909 | ||||| |||||||| || || || || ||||| | | || ||| || ||| ||| Sbjct 3510741 AATATCGTCACCGTGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGT-TCGG 3510683 Query 79910 CGAC 79913 |||| Sbjct 3510682 CGAC 3510679 Score = 322 bits (356), Expect = 5e-83 Identities = 1108/1693 (65%), Gaps = 71/1693 (4%) Strand=Plus/Plus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 ||||||||| |||| ||| |||||||| ||| || || ||| | || || || ||||| Sbjct 3510754 GAGACATACAACCTTATGTCCCAGAAGTGCTTTACTCATGCGTCACCCACGCTCTTCAAT 3510813 Query 19226 GCCGGTACGA-ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAG 19284 ||||| || ||| ||| ||| |||| ||| ||| | | | ||||||||||| || Sbjct 3510814 GCCGGAACACCACAGCCC-CAGCTGTCCTCCTGCTTCTTGATCGACATGAAGGATGATAG 3510872 Query 19285 CATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGG 19344 ||| ||||||||||| || || |||||| || || ||||||||| | || || Sbjct 3510873 CATCGAGGGCATCTATGACACACTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGG 3510932 Query 19345 TATCGGGATCCACTGCTCGAAT--ATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 ||||| || | ||| | | | ||||| | | ||| | || || || || Sbjct 3510933 CATCGGTCTCAA-TGCCC-ACTGCATCCGTGCAACTGGCTCCTACATTGCAGGAACTAAT 3510990 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 ||| | | | || || | || ||| | || || |||||||| |||||| | |||||| Sbjct 3510991 GGAACATCAAATGGGCTCATTCCTATGTTGCGTGTTTTCAACAATACGGCCCGCTACGTC 3511050 Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522 ||||||| ||| ||| || || | || ||||||||||| |||||||||||||| Sbjct 3511051 GACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCT 3511110 Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582 || ||| | || ||| | | || | |||||| || | || || | || || Sbjct 3511111 GATGTCTTTGACTTCTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGT 3511170 Query 19583 GACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAA 19642 ||||| ||| || |||||| || ||| | ||||||||| || |||||| || | Sbjct 3511171 GACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAG 3511230 Query 19643 GAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCG 19702 |||||| || | ||||| || ||| || || || | || ||||||||||| | | Sbjct 3511231 GAATGGACTCTTTTCTGCCCTCATGAAGCACCAGGACTGGCTGATGTCTACGGCGATGAG 3511290 Query 19703 TTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCC 19762 || || ||| | ||| || || | | ||||||| | || ||| |||| Sbjct 3511291 TTTAAGGAGCTCTACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCAGACCGTCAAGGCC 3511350 Query 19763 CGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821 | | | | ||| | ||| | || | ||| ||||||||| || || |||||| Sbjct 3511351 CAGAAGCTGTGGTA-TGCGATTCTTGAGGCTCAGACCGAGACCGGTACTCCCTACATGCT 3511409 Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGA-TCAAGTCGT 19880 ||||||||| ||| ||| ||| || ||||||||| | ||| | | || | | | Sbjct 3511410 CTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGCACCATTCGAAGC-T 3511468 Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940 | || || || || || ||| | ||| | | ||| |||||| ||| || || ||| Sbjct 3511469 CAAATCTTTGCACCGAGATCGTCGAGTTCACTGCGCCAGACGAGGTTGCTGTCTGCAATT 3511528 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCT-TCGACTTTGCCAAATT- 19998 |||| |||||| ||| || || |||||| | | ||| | ||| | || | || Sbjct 3511529 TGGCTTCCCTGGCCCTTCCCACCTTCGTCGA-CCAATCTCGTGGCGAGTATG---ACTTC 3511584 Query 19999 -GT-------ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGG 20050 || | ||||| || | || ||||| || ||| |||| ||||||| Sbjct 3511585 GGTCGCCTTCATGAGGTCACTCAAGTGGTCACACGCAATTTGAACAAAATCATCGACATC 3511644 Query 20051 AACTTTTA-CCCGACC--GAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCG 20107 |||| || |||| || |||||| | ||| ||||||||||| || || || | Sbjct 3511645 AACTACTATCCCGTCCCTGAGGCGAAG---AAGAGTAATATGCGCCATCGACCTATTGGC 3511701 Query 20108 ATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCT--CATTCGACGATC 20165 | || || || || || || || | ||| | ||||| || ||| | || ||| || Sbjct 3511702 CTTGGGGTTCAAGGTCTTGCAGATGCCTTCCT--TGCTCTGCGTCTTCCCTTTGACTCTC 3511759 Query 20166 CCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGG 20225 | |||| || | ||||||| ||||| ||| || | ||||| ||||| ||| | Sbjct 3511760 CGGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATCTACCATGCGGCTCTCACTG 3511819 Query 20226 AATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGT 20285 |||||||| || || | ||| | ||| | || ||||||| | |||| || | | Sbjct 3511820 CTTCGTGCGAGCTTGCAAGGGAGCAAGGCACATATGAGACGTACGAGGGCAGCCCAGTCT 3511879 Query 20286 CCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC--GC 20343 | | || || |||||| ||||||||| ||||| ||| | ||| | | Sbjct 3511880 CACAAGGCATGCTCCAGTATGACATGTGGAATGTCACCCCATCTGACCTGTGGGACTGGG 3511939 Query 20344 CCTC----AAGGTTGAGAT---CAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGC 20396 ||| |||| || || |||| | || |||||||||| | ||||| || | Sbjct 3511940 ACTCTTTGAAGGCCGACATTGCCAAG---TATGGTGTTCGCAACTCTCTCCTCGTTGCTC 3511996 Query 20397 CCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTAC 20455 | ||||| ||||| || ||| ||||||| | || ||||||| | ||||| ||||| || Sbjct 3511997 CTATGCCTACCGCGTCAACCTCCCAGATTCTTGGCAACAACGAATGCTTT-GAGCCATAT 3512055 Query 20456 ACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCAC 20515 || |||||||||||| |||||| ||||| ||||||||| || ||| ||| | | Sbjct 3512056 ACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTC--CA-GGTCGTCAA-CCC 3512111 Query 20516 CTGGTCCGCGACTTGCAGAA---GATCGATATG------TGGTCGCCCAAAATTAAGAAT 20566 ||| |||| || | | ||||| || ||||| || || ||||| Sbjct 3512112 GTGG-----CTCTTGAAGGATCTGGTCGATCTGGGTCTCTGGTCAGATAACATGAAGAAC 3512166 Query 20567 GAAATTGTCCGAGCCGGCGGGAGCGTCCAG-GCAT--TGGATATCCCCCAGAACCTCAAG 20623 || || | ||| || || ||| ||| | ||||| || ||||| Sbjct 3512167 CGTATCATCGCCGACGGTGGTTCGGTTCAGAACATCCCCAACATCCCTGCCGACATCAAG 3512226 Query 20624 GACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGC-ATCATCGACATGGCGGCCGA 20682 | | |||| ||| || ||||||||| || | || | ||| || | ||||||||||| Sbjct 3512227 GCACTGTACAAGACTGTCTGGGAAATCAGCCA-ACGAACTATCCTCCAGATGGCGGCCGA 3512285 Query 20683 TCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCT 20742 ||| ||||||| ||||||||||||||| || | || || | || | | || | | | Sbjct 3512286 TCGGGGCGCCTTCATCGACCAGTCCCAATCCTTGAACATCCACTTGAAAGAACCCACCAT 3512345 Query 20743 GGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTA 20802 || || | | |||||||| | ||||||| | | ||| ||||| || |||||||| Sbjct 3512346 GGGCAAAATCACATCCATGCACTTTGCCGGCTGGAAAATGGGTCTCAAAACTGGCATGTA 3512405 Query 20803 CTATCTGCGGACC 20815 ||| || || ||| Sbjct 3512406 CTACCTCCGCACC 3512418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524710864720