Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 215 6e-51
seq5 93.3 5e-14
>seq4
Length=4310093
Score = 215 bits (238), Expect = 6e-51
Identities = 502/752 (67%), Gaps = 4/752 (1%)
Strand=Plus/Plus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGT-GAGACGTACGA 53253
||||| || || | ||||||||||||||||| || | || | ||||| ||| |
Sbjct 3510706 ATGCGTGTGGCTGTTGGTATCCACGGTGACGA-TATTGAGAAGACCATTGAGACATACAA 3510764
Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313
| | ||| ||| |||| |||||| || || | || || || ||||| || || ||
Sbjct 3510765 CCTTATGTCCCAGAAGTGCTTTACTCATGCGTCACCCACGCTCTTCAATGCCGGAACACC 3510824
Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373
|| || ||| |||| ||||||| || | | ||||||||||| ||||| |||||
Sbjct 3510825 ACAGCCCCAGCTGTCCTCCTGCTTCTTGATCGACATGAAGGATGATAGCATCGAGGGCAT 3510884
Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433
||| || || |||||| |||||| ||||||||| | ||||| |||||| || |
Sbjct 3510885 CTATGACACACTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGGCATCGGTCTCAA 3510944
Query 53434 CTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
||| | | ||||||| | ||| | || || || || || | |||
Sbjct 3510945 -TGCCCACTGCATCCGTGCAACTGGCTCCTACATTGCAGGAACTAATGGAACATCAAATG 3511003
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| || | |||||| | || || |||||||| |||||||| |||||| ||||||| ||
Sbjct 3511004 GGCTCATTCCTATGTTGCGTGTTTTCAACAATACGGCCCGCTACGTCGACCAGGGCGGCA 3511063
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | || ||||||||||| ||||| |||||||| || | | || |
Sbjct 3511064 ACAAGCGACCTGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTTGACT 3511123
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
| | | || | ||| || || | ||||| | || |||||||||||| |
Sbjct 3511124 TCTTGAATCTAAGAAAGAACCACGGCAAGGAAGAAGTCCGTGCCCGTGACCTGTTCTATG 3511183
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
|| |||||| || ||| | |||||| | || |||||| || |||| ||| ||
Sbjct 3511184 CTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGGAATGGACTCTTT 3511243
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792
| ||||| | || || || || | ||||||||| || |||||||| ||| | |
Sbjct 3511244 TCTGCCCTCATGAAGCACCAGGACTGGCTGATGTCTACGGCGATGAGTTTAAGGAGCTCT 3511303
Query 53793 ATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGG 53852
| || || | | ||||||| | ||| |||||||| | || | |||
Sbjct 3511304 ACGAGAGATATGAAAAGGAGGGCCGTGGCCGTCAGACCGTCAAGGCCCAGAAGCTGTGGT 3511363
Query 53853 ATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGG 53912
|||| || || || ||| ||||| || || || |||||| |||||||||| |
Sbjct 3511364 ATGCGATTCTTGAGGCTCAGACCGAGACCGGTACTCCCTACATGCTCTACAAGGATGCCT 3511423
Query 53913 TCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|||| ||||||||||||||||||| | |||
Sbjct 3511424 GCAACAGGAAGAGCAACCAGAAGAACTTGGGC 3511455
Score = 89.7 bits (98), Expect = 6e-13
Identities = 303/457 (66%), Gaps = 29/457 (6%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| || || ||||| |||||||| || | ||||| | ||||||
Sbjct 3511975 CGCAACTCTCTCCTCGTTGCTCCTATGCCTACCGCGTCAACCTCCCAGATTCTTGGCAAC 3512034
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
||||| || ||||| || || ||||||||||| || || ||| || ||||||
Sbjct 3512035 AACGAATGCTTTGAGCCATATACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAG 3512094
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| | ||||| | ||| | ||||| ||| | |||| ||| | |
Sbjct 3512095 TTCCAGGTCGTCAACCCGTGGCTCTTGAAGGATCTG--GTCGATC------TGGGTCTCT 3512146
Query 55664 ---CAGAT--CAAGACGGA---TATTGT-GCGGAACGGGGGGTCCGTCCAGAA--TCTGG 55712
||||| || || | | ||| | || || ||| || || || ||||| ||
Sbjct 3512147 GGTCAGATAACATGAAGAACCGTATCATCGCCGA-CGGTGGTTCGGTTCAGAACATCCCC 3512205
Query 55713 AGATTCCTCTGC-GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATT--CCACAGAAG 55768
| ||| |||| | | |||||| | ||| ||| || ||||| || ||| |||
Sbjct 3512206 AACATCC-CTGCCGACATCAAGGCACTGTACAAGACTGTCTGGGAAATCAGCCAACGAAC 3512264
Query 55769 AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC 55828
|| | | ||| || ||||| || || | ||||||||||||||| || |||||
Sbjct 3512265 TATCC--TCCAGATGGCGGCCGATCGGGGCGCCTTCATCGACCAGTCCCAATCCTTGAAC 3512322
Query 55829 ATCTTCATG-GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAA 55887
||| | || |||| || || ||| ||| | | || ||||||||| ||| |||||
Sbjct 3512323 ATCCACTTGAAAGAACCCACCA-TGGGCAAAATCACATCCATGCACTTTGCCGGCTGGAA 3512381
Query 55888 GAAGGGACTCAAGACGGGTATGTACTATCTGCGGACC 55924
| ||| ||||| || || |||||||| || || |||
Sbjct 3512382 AATGGGTCTCAAAACTGGCATGTACTACCTCCGCACC 3512418
>seq5
Length=3889323
Score = 93.3 bits (102), Expect = 5e-14
Identities = 171/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 152074 CGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTC 152133
|| || ||||| || || || ||||| || ||||||| |||||| | || |||||| |
Sbjct 3467919 CGAGTACCAAATTGGCCTGATGGCTCAAGCAGGTTGATGTTGTTCGATCCGACGAAAGTT 3467860
Query 152134 TGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGC 152193
||||||||| ||||| || || ||| | || ||||||||||| || |||
Sbjct 3467859 TGAGCCAAACCGACAATTGTCTGTTGAAGAGAAGTCTCGCCGTGGTGATAAGCGGTCATT 3467800
Query 152194 TCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGA 152253
| | | ||||||| | || || ||||| ||| || ||||||| ||| |
Sbjct 3467799 CCACCCACCAGACCCGCCAGTTCAGCGACTTTCATATCCTTCTTCAGGTTACGCTTAAAG 3467740
Query 152254 CAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAA 152313
|| || || || ||||| |||||| || || | ||||| || ||| |||||| ||
Sbjct 3467739 CATGCATACATGACCTTTCGCTGGCCGGGCTTTAGGCCGTCGACGACGGAAGGAATGGAC 3467680
Query 152314 CGCTTGATGTC 152324
|| || ||||
Sbjct 3467679 CGGATGTTGTC 3467669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215911077400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |