Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 5e-13 >seq4 Length=4310093 Score = 89.7 bits (98), Expect = 5e-13 Identities = 236/355 (66%), Gaps = 8/355 (2%) Strand=Plus/Plus Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||| ||| || | || || || || ||||||||| | | ||| | Sbjct 1207365 GACGTAGAACTGGGCGAACATATGACAGGGCGGCAGCGCCATCTTGGACAAGTCCGCCAC 1207424 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 ||||||||||| | | |||||| | ||||| ||||| |||||| || || ||| Sbjct 1207425 GTTCCACGCGCTGAGGATGATCCTCCGGTCATATGGGTTGGTCTTCAACTTG-CG--CAC 1207481 Query 6847 G---TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCG-CTCCCCCGATACT 6902 | | || | ||| ||| | ||| | || | ||||| | |||| || | || | Sbjct 1207482 GATTTCCTTGATCTGATCCACGCCCCGCCCGGTGTAGTCTG-TTCGACTGTCATTGTATT 1207540 Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962 | || || || || | |||||| || ||||| || ||||| | ||||||||| || || Sbjct 1207541 CGGCGCCGAAATGGCGCCACTGAAAGCCGTACACGGGGCCGAGGTCGCCCTCTTCGCGCT 1207600 Query 6963 ATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCC 7022 | ||| ||| | ||||| || || || | ||||||| | |||||||| | | | Sbjct 1207601 CCGTGAAGCCCAGTTTGTCGAGGAATTCCCTCGACCCGTTGCCATCCCAGATGTGGATGC 1207660 Query 7023 CCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077 || | |||||| ||| | | ||||| || ||||||||| || ||||| Sbjct 1207661 CCGCGTCCGAGAGTGGCTTAGAGGTCGTGCAGCCTGACACGAACCAGAGTAGCTC 1207715 Score = 89.7 bits (98), Expect = 5e-13 Identities = 236/355 (66%), Gaps = 8/355 (2%) Strand=Plus/Minus Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327 ||||| || ||||||||| || ||||| | | ||| |||||| | ||| | Sbjct 1207715 GAGCTACTCTGGTTCGTGTCAGGCTGCACGACCTCTAAGCCACTCTCGGACGCGGGCATC 1207656 Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387 | |||||||| | ||||||| | || || || ||||| | ||| ||| | || Sbjct 1207655 CACATCTGGGATGGCAACGGGTCGAGGGAATTCCTCGACAAACTGGGCTTCACGGAGCGC 1207596 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 || ||||||||| | ||||| || ||||| || |||||| | || || || || || || Sbjct 1207595 GAAGAGGGCGACCTCGGCCCCGTGTACGGCTTTCAGTGGCGCCATTTCGGCGCCGAATAC 1207536 Query 34448 CGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTA---CGTGAT 34503 | || |||| | ||||| | || | ||| | ||| ||| | || | |||| Sbjct 1207535 AATGACAGTCGAA-CAGACTACACCGGGCGGGGCGTGGATCAGATCAAGGAAATCGTG-- 1207479 Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 || || |||||| ||||| ||||| | |||||| | | ||||||||||| | Sbjct 1207478 CG-CAAGTTGAAGACCAACCCATATGACCGGAGGATCATCCTCAGCGCGTGGAACGTGGC 1207420 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 ||| | | ||||||||| || || || || | || ||| ||||||||| Sbjct 1207419 GGACTTGTCCAAGATGGCGCTGCCGCCCTGTCATATGTTCGCCCAGTTCTACGTC 1207365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262327157360