Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 89.7 5e-13
>seq4
Length=4310093
Score = 89.7 bits (98), Expect = 5e-13
Identities = 236/355 (66%), Gaps = 8/355 (2%)
Strand=Plus/Plus
Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
||||||||| ||| || | || || || || ||||||||| | | ||| |
Sbjct 1207365 GACGTAGAACTGGGCGAACATATGACAGGGCGGCAGCGCCATCTTGGACAAGTCCGCCAC 1207424
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||||||||| | | |||||| | ||||| ||||| |||||| || || |||
Sbjct 1207425 GTTCCACGCGCTGAGGATGATCCTCCGGTCATATGGGTTGGTCTTCAACTTG-CG--CAC 1207481
Query 6847 G---TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCG-CTCCCCCGATACT 6902
| | || | ||| ||| | ||| | || | ||||| | |||| || | || |
Sbjct 1207482 GATTTCCTTGATCTGATCCACGCCCCGCCCGGTGTAGTCTG-TTCGACTGTCATTGTATT 1207540
Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962
| || || || || | |||||| || ||||| || ||||| | ||||||||| || ||
Sbjct 1207541 CGGCGCCGAAATGGCGCCACTGAAAGCCGTACACGGGGCCGAGGTCGCCCTCTTCGCGCT 1207600
Query 6963 ATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCC 7022
| ||| ||| | ||||| || || || | ||||||| | |||||||| | | |
Sbjct 1207601 CCGTGAAGCCCAGTTTGTCGAGGAATTCCCTCGACCCGTTGCCATCCCAGATGTGGATGC 1207660
Query 7023 CCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077
|| | |||||| ||| | | ||||| || ||||||||| || |||||
Sbjct 1207661 CCGCGTCCGAGAGTGGCTTAGAGGTCGTGCAGCCTGACACGAACCAGAGTAGCTC 1207715
Score = 89.7 bits (98), Expect = 5e-13
Identities = 236/355 (66%), Gaps = 8/355 (2%)
Strand=Plus/Minus
Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327
||||| || ||||||||| || ||||| | | ||| |||||| | ||| |
Sbjct 1207715 GAGCTACTCTGGTTCGTGTCAGGCTGCACGACCTCTAAGCCACTCTCGGACGCGGGCATC 1207656
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387
| |||||||| | ||||||| | || || || ||||| | ||| ||| | ||
Sbjct 1207655 CACATCTGGGATGGCAACGGGTCGAGGGAATTCCTCGACAAACTGGGCTTCACGGAGCGC 1207596
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
|| ||||||||| | ||||| || ||||| || |||||| | || || || || || ||
Sbjct 1207595 GAAGAGGGCGACCTCGGCCCCGTGTACGGCTTTCAGTGGCGCCATTTCGGCGCCGAATAC 1207536
Query 34448 CGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTA---CGTGAT 34503
| || |||| | ||||| | || | ||| | ||| ||| | || | ||||
Sbjct 1207535 AATGACAGTCGAA-CAGACTACACCGGGCGGGGCGTGGATCAGATCAAGGAAATCGTG-- 1207479
Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563
|| || |||||| ||||| ||||| | |||||| | | ||||||||||| |
Sbjct 1207478 CG-CAAGTTGAAGACCAACCCATATGACCGGAGGATCATCCTCAGCGCGTGGAACGTGGC 1207420
Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618
||| | | ||||||||| || || || || | || ||| |||||||||
Sbjct 1207419 GGACTTGTCCAAGATGGCGCTGCCGCCCTGTCATATGTTCGCCCAGTTCTACGTC 1207365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262327157360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |