Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 >seq5 Length=3889323 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||||||||| ||||| || |||| ||| || || |||| ||||| || || || ||||| Sbjct 1366539 CTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAA 1366480 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||| ||||| |||| || | || ||| ||||| ||| || |||| ||| Sbjct 1366479 GATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGA-CGT 1366421 Query 39213 CGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | |||||||||||||| || || | ||||| | || || || || || || | Sbjct 1366420 TGTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGA 1366361 Query 39272 CAAAGATTTGCAT 39284 | ||||||||||| Sbjct 1366360 CGAAGATTTGCAT 1366348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| || || || || || || || | || ||||| |||| |||||||| Sbjct 1366779 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTCAAGCTG 1366720 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || | ||||||||||||| || | | ||| ||||| ||||| Sbjct 1366719 CTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGAATTTT 1366660 Query 39201 CTGTTTGAGCGTCGCCACC-GTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | |||| ||| | || ||||| || || || || | ||||||| | || |||| Sbjct 1366659 CGACTTGA-CGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTTGCCCG 1366601 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || ||||||||||| Sbjct 1366600 TGAGGGTCTTCACGAAGATTTGCAT 1366576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545531943869