Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4 172 8e-38
seq6 102 1e-16
>seq4
Length=4310093
Score = 172 bits (190), Expect = 8e-38
Identities = 583/898 (65%), Gaps = 10/898 (1%)
Strand=Plus/Minus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
|||||||| || ||||| | | || ||||||| || | ||||||||||| |
Sbjct 3511487 ATCTCGGTGCAAAGATTTGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTG 3511428
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852
||||| | ||||| || || || | ||||| ||||| || |||| | || | |||
Sbjct 3511427 TTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCGGTCTCGGTCTGAGCCTCAAGAATC 3511368
Query 77853 GATTTCCAGACGACTCTAG-CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTG 77911
| | ||| | | ||| | | || | | | || | ||| ||||||||
Sbjct 3511367 GCATACCACA-GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCCTTTTCATATCT 3511309
Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971
|| ||| | ||| ||||| || | |||||| ||| ||| || ||||| ||
Sbjct 3511308 CTCGTAGAGCTCCTTAAACTCATCGCCGTAGACATCAGCCAGTCCTGGTGCTTCATGAGG 3511249
Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031
||| | | | ||| || | | || || || | ||| || | ||||| ||||
Sbjct 3511248 GCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCA 3511189
Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091
| |||| || || || |||| | |||||| || || |||||| | ||||
Sbjct 3511188 CATAGCATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTTAGATT 3511129
Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151
| || || | | ||||| |||||||| || || || || || | | | ||||||||
Sbjct 3511128 CAAGAAGTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCAGGTCG 3511069
Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211
|| || || ||||| || | || | ||| || || || |||| | |||||| |||||
Sbjct 3511068 CTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAAACACGCAACATAGGAAT 3511009
Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTA 78269
| || || ||||||||||| ||||| | ||| || ||| |||| || || | |
Sbjct 3511008 GAGCCCATTTGATGTTCCATTAGTTCCTGCAATGTAGGAGCCAGTTGCACGGATGCAGTG 3510949
Query 78270 CTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTA 78329
|| || | || || || || || |||| || || | || || || | |||
Sbjct 3510948 GGCATTGAGA--CCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGTGTG 3510891
Query 78330 TCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 78389
|| ||||| ||||| || || |||||| |||||| | | || ||| |||| ||
Sbjct 3510890 TCATAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAGGAGGACAGCTGG 3510831
Query 78390 TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAA 78449
| || ||||| ||||| || | || || || ||||| ||||| || || | ||
Sbjct 3510830 GGCTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGACGCATGAGTAAAGCACTTCTGGGAC 3510771
Query 78450 AGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTAC 78508
| || |||||||| ||||| | || || || || | || || || || || ||
Sbjct 3510770 ATAAGGTTGTATGTCTCAATGGTCTTCTCAATATCGTCACCG-TGGATACCAACAGCCAC 3510712
Query 78509 ACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT-ATTATTTATTTTCAACAAGTATG 78567
|||||| | ||| ||||| |||| ||| || ||| || ||||||| || |||||
Sbjct 3510711 ACGCATAATCATGTGCTGTGGTCGTTC-GGCGACTTGCTTGCCGATTTTCAGCAGGTATG 3510653
Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625
| || ||||| || || |||||||| || | ||| ||||| || ||||| | |||
Sbjct 3510652 ACTTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCCCTGTCGTAGACAAT 3510595
>seq6
Length=3486194
Score = 102 bits (112), Expect = 1e-16
Identities = 215/320 (67%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
||||||||||| || | || ||||| | | || | ||| || ||||| ||||||
Sbjct 2268700 CATGCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2268641
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || || | |||||||| || || || || || ||||||||||||||
Sbjct 2268640 CCAGGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAG 2268581
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GT 48317
|| || || ||||| || || || |||| | || || ||| || || |
Sbjct 2268580 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2268521
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377
||||| | | ||||| || |||||||| | ||||| || || || |||||||
Sbjct 2268520 ATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCG 2268461
Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437
|| || || | || || ||| ||| | ||||| || || || | || ||||||
Sbjct 2268460 AACAGGTAGGTCTTCTCTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATC 2268401
Query 48438 TCGGAGTGAATATTTTCAAT 48457
|||||||| || || || ||
Sbjct 2268400 TCGGAGTGGATGTTCTCCAT 2268381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668687116320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |