Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq4 212 9e-50
seq6 116 5e-21
>seq4
Length=4310093
Score = 212 bits (234), Expect = 9e-50
Identities = 547/821 (67%), Gaps = 12/821 (1%)
Strand=Plus/Minus
Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657
|| || | ||| || | ||||| |||| | |||| || || || |||| | |
Sbjct 3511217 ACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGCACGGACT 3511158
Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717
||||| || || |||||| | |||| | ||| || | | ||||| ||||||||
Sbjct 3511157 TCTTCCTTGCCGTGGTTCTTTCTTAGATTCAAGAAGTCAAAGACATCAGCGTGCCATGGC 3511098
Query 76718 TCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCA 76777
|| || || || || | | |||| ||||| || || || ||||| || | || | |||
Sbjct 3511097 TCCAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCC 3511038
Query 76778 GTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAA 76837
|| || || |||| | |||||| ||||| | || || ||||| ||||| ||||| | |
Sbjct 3511037 GTATTGTTGAAAACACGCAACATAGGAATGAGCCCATTTGATGTTCCATTAGTTCCTGCA 3510978
Query 76838 ATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTT 76895
|| || ||| |||||| || | | || || | || || || || || | |
Sbjct 3510977 ATGTAGGAGCCAGTTGCACGGATGCAGTGGGCATTGAGA--CCGATGCCACCAGCGGTCT 3510920
Query 76896 TAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA 76955
| ||||| | |||||| || | |||||||||||||||||| || ||||||||| |||
Sbjct 3510919 TGGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATGCCCTCGATGCTATCATCCTTCA 3510860
Query 76956 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAG 77015
||| | | || ||| |||| || | || ||||| ||||| || | || |
Sbjct 3510859 TGTCGATCAAGAAGCAGGAGGACAGCTGGGGCTGTGGTGTTCCGGCATTGAAGAGCGTGG 3510800
Query 77016 GAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT-AACTGCTTCT 77074
| || |||||||| || || || | || | || |||||||| ||||| || | ||
Sbjct 3510799 GTGACGCATGAGTAAAGCACTTCTGGGACATAAGGTTGTATGTCTCAATGGTCTTC-TCA 3510741
Query 77075 ATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 77133
||||| || | || || || ||||| |||||||| | ||| ||||| |||||||| |
Sbjct 3510740 ATATCGTCACCG-TGGATACCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGC 3510682
Query 77134 AGTCTT-ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 77192
| ||| || ||||||| || |||||| || ||||| || || |||||||| || |
Sbjct 3510681 -GACTTGCTTGCCGATTTTCAGCAGGTATGACTTCTCCAACGTCTTGAAACCAAAGTATT 3510623
Query 77193 TGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAA 77252
||| ||||| || ||||| | ||| |||| || | || ||| | | | | |
Sbjct 3510622 GGTAGTTGAAGTCCCTGTCGTAGACAATGGCCGAGTTCAATTCGTCAGCGTGTCTCATGA 3510563
Query 77253 C-AATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACA 77311
| || | | | | | || || || || ||| | | || || ||||| |
Sbjct 3510562 CGCATTCGTACGTCTCT-TTGGAGATCATGGGGGATAATTTGTTGTTCTTGGGATTGATG 3510504
Query 77312 TAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTC 77371
|||| | | | |||| || ||| | ||| | || || |||| |||||| ||||||
Sbjct 3510503 TAGTGATACAGGTCTGAAATAACGGCAGAAAACTGCTTCTTGGTTTGCTTGTGGAGATTC 3510444
Query 77372 GATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
|| || || || | || || || || |||||||| |||||
Sbjct 3510443 GAGACAGCAATACGTGCTGCAAGGATGGCATAGTCGGGATG 3510403
>seq6
Length=3486194
Score = 116 bits (128), Expect = 5e-21
Identities = 218/320 (68%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689
||||||||||| || | ||| ||||| | | || | ||| || ||||| |||||
Sbjct 2268700 CATGCAAAATCTGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2268641
Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749
|||||||| || || | |||||||| || || || || || ||||||||||||||
Sbjct 2268640 CCAGGCATCAGGCCCTTGCTCTTGAGCCAGAAAATCGCAGCAAATGATCCAGAAAAGAAG 2268581
Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA--- 46806
|| || || || || ||||| || || |||| | || || ||| || |||| |
Sbjct 2268580 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2268521
Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTA 46866
||||| || ||||||| || ||||| || | ||||| || || || |||||||
Sbjct 2268520 ATCCATCTAAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTGTCGATAGCATCG 2268461
Query 46867 AAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATT 46926
|| || || | || || | ||| | || ||||| || || | || ||||||
Sbjct 2268460 AACAGGTAGGTCTTCTCTTTGGGATCGCTCACGTATGTGTCGATGAGGAGTGAATACATC 2268401
Query 46927 TCTGAATGAATGTTTTCAAT 46946
|| || || ||||| || ||
Sbjct 2268400 TCGGAGTGGATGTTCTCCAT 2268381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934284148160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |