Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 2e-21
seq1 100 7e-16
>seq5
Length=3889323
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||||||| || ||||| || || || || || ||||||||||| || | | ||||
Sbjct 1366793 AGTCTGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGG 1366734
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| || || || || ||||||||||| | | ||||||||| | | ||| || |||
Sbjct 1366733 CCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCC 1366674
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| ||||||||||| ||||| | || | | || || || || || || ||
Sbjct 1366673 TTGTCTTGAATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTG 1366614
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||||||||| ||||||||||||| |||||
Sbjct 1366613 ATAGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 1366576
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| || || || || | ||| ||| || || |||||||| |||| | ||||
Sbjct 1367021 AGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGG 1366962
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| ||||| || || ||||||||||| | ||||||||||| | | ||| || |||
Sbjct 1366961 CCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGGATGCCCTCC 1366902
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || |||||| | || | | ||||||| ||||| ||||| | |||
Sbjct 1366901 TTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCTGAGCTCTCAACTTCCAATGTA 1366842
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || | ||||| ||||||| ||||||
Sbjct 1366841 ATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || |||||||| ||||||||||||||| | || |
Sbjct 1366338 GAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCG 1366279
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || ||| || |||||||| || | |||||| || | | || |||||
Sbjct 1366278 GCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTC 1366219
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| | || | | |||| ||| || ||||| ||
Sbjct 1366218 CTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGGGT 1366159
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||| ||||||| ||||||
Sbjct 1366158 GATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1366120
Score = 105 bits (116), Expect = 2e-17
Identities = 157/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| ||||| ||||| |||||||||||||| ||||| |||| | || |
Sbjct 1366566 GAGACGGAGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGAAAGGGTGCG 1366507
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| || || ||||| || | ||||| || | | || ||
Sbjct 1366506 GCCGTCTTCAAGTTGCTTT--CCAGCAAAGATGAGACGTTGCTGATCGGGAGGAATGCCC 1366449
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||| || || ||||| | || | | | || ||| || |||||
Sbjct 1366448 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCGACCTCAAGG 1366389
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||||||||| ||||||| |||||
Sbjct 1366388 GTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1366348
>seq1
Length=6061779
Score = 100 bits (110), Expect = 7e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|||||||| ||||| ||| || || | || ||||| || || |||||||||||
Sbjct 4126221 TTTTGGATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 4126280
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||| | | ||| || ||||| ||||| || || ||||||| | ||
Sbjct 4126281 AGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 4126340
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| ||||||| || || || || || || || ||||||||||| ||||| ||||||
Sbjct 4126341 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 4126400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820607816723
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