Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 140 2e-28
seq1 87.8 1e-12
>seq5
Length=3889323
Score = 140 bits (154), Expect = 2e-28
Identities = 170/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | || || || || ||| ||||| ||||||||||| ||
Sbjct 1366806 CATACCACCACGAAGTCTGAGAACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 1366747
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| || |||| || |||||||| ||||| |||||||| |||||||| || |
Sbjct 1366746 TGAGAGCGTTCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGG 1366687
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| || || ||| ||| | | | || || || | ||||||
Sbjct 1366686 TGGGATACCCTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTC 1366627
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | ||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 1366626 GACCTCTAGCGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCATG 1366575
Score = 138 bits (152), Expect = 8e-28
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | |||||||| ||||||||| | ||||||||||| || |||||||| ||||
Sbjct 1367030 CCGCCACGCAGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 1366971
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| |||||||| | |||||| || | ||
Sbjct 1366970 AGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGG 1366911
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| |||||| ||| || ||| | |||||||| | | || |
Sbjct 1366910 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT--CAATGGTGTCTGAGCTCTCAA 1366853
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||| ||||| ||||| || || | |||||| |||||||| |||||
Sbjct 1366852 CTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 120 bits (132), Expect = 2e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || ||| || ||||||||||||||| || ||| | || ||
Sbjct 1366328 ACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCTCAGGGTGCGGCCATCCTCG 1366269
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || ||||| | ||||||||||| | ||| | |||||||| |||
Sbjct 1366268 AGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 1366209
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||||||| || || ||||| | || || ||||
Sbjct 1366208 ATCTTGCTCTTGACATTGT--CGATGGTGTCGCTCGACTCAACCTCAAGGGTGATTGTCT 1366151
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| || ||||||||||| |||||||| ||||||||
Sbjct 1366150 TGCCGGTGAGGGTCTTGACGAAGATCTGCATGAT 1366117
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||| |||||||| ||||| |||| || ||| |||| || || ||||| || |||||
Sbjct 1366539 CTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAA 1366480
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||| | ||| |||||||| | ||| | || ||||| || ||||| ||| | |
Sbjct 1366479 GATGAGACGTTGCTGATCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACGTT 1366420
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| ||| || || ||||| | || || ||||| || ||||| ||||| ||
Sbjct 1366419 GTCGATGGTATCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGAC 1366360
Query 44326 GAAGATTTGCATG 44338
|||||||||||||
Sbjct 1366359 GAAGATTTGCATG 1366347
>seq1
Length=6061779
Score = 87.8 bits (96), Expect = 1e-12
Identities = 131/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||||||||| ||||| ||| | || |||| || || ||||| ||||| ||||
Sbjct 4126219 CCTTTTGGATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 4126278
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | || ||||| || ||||| || || |||
Sbjct 4126279 TCAGTCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 4126338
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | |||||| ||||| | || || ||||| |||||||||||||| ||
Sbjct 4126339 --CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 4126396
Query 44326 GAAG 44329
||||
Sbjct 4126397 GAAG 4126400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990342964021
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |