Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 2e-24
seq3 98.7 9e-16
>seq5
Length=3889323
Score = 127 bits (140), Expect = 2e-24
Identities = 169/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || | | |||||| |||| |||||||||||||||||||| ||||||||
Sbjct 1367030 CCGCCACGCAGTCTCAGCACCAGGTGCAAAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 1366971
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || ||||||||||||||||| |||| | ||| ||||| | ||
Sbjct 1366970 AGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCTCTGCTGGTCGGGTGGG 1366911
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| || |||||||||| ||| || ||| || | | | ||||| ||| |||
Sbjct 1366910 ATGCCCTCCTTGTCCTGGATCTTCGACTT-GACATTGTCAATGGTGTCTGAGCT---CTC 1366855
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| || || || || || |||| ||||| ||||| ||||||||
Sbjct 1366854 AACTTCCAATGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 1366804
Score = 123 bits (136), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||| ||||| || ||| ||||| ||||| || |||
Sbjct 1366347 GCCACCACGGAGACGGAGGACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCGCT 1366288
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| | || |||||||| || || ||||| || |||||||| || || | ||
Sbjct 1366287 CAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGG 1366228
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
|| || ||||||||| ||| || ||| || | ||| ||||||||||||||
Sbjct 1366227 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATG--GTGTCGCTCGACTCA 1366170
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| | || || || || || || || ||||| ||||| |||||||||
Sbjct 1366169 ACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 1366119
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || ||| |||||||| ||||| ||||| ||||| || || |||| ||
Sbjct 1366784 ACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCCTCA 1366725
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||||||||| |||| ||||| ||||| | || | | |||||||| | ||
Sbjct 1366724 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGT-CTTG 1366666
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
| |||| | | ||| | | | || || || || ||||| | ||| || || ||
Sbjct 1366665 AATTTTCGACTTGACGTTGTCAATTGTATCCGAGGATTCGACCTCTAGCGTGATAGTCTT 1366606
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| || ||||| ||||| || ||||||
Sbjct 1366605 GCCCGTGAGGGTCTTCACGAAGATTTGCATG 1366575
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| || || ||| || || || || ||||||||
Sbjct 1366575 GCCACCACGGAGACGGAGGACGAGATGGAGAGTCGACTCTTTTTGGATATTGTAGTCGGA 1366516
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| |||| || || ||||| || || || || || || || || || | ||
Sbjct 1366515 AAGGGTGCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATGAGACGTTGCTGATCGGGAGG 1366456
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || ||||||||| ||| || ||| | || | | | || ||||||||||| |
Sbjct 1366455 AATGCCCTCCTTGTCTTGGATCTTGCTCTTGA-CGTTGTCGATGGTATCGCTCGACTCGA 1366397
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || || || ||||| ||||| || ||||||
Sbjct 1366396 CCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATG 1366347
>seq3
Length=4945454
Score = 98.7 bits (108), Expect = 9e-16
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || |||| | ||||| || | || ||||||||| ||| | ||||| ||
Sbjct 2827484 CCGCCCCGGAGACTGAGGACCAGGTGAATGGTCGACTCCTTCTGGATGCTGTAGTCCGAA 2827543
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| |||| |||||||||||||| |||||||| || ||||| || |||
Sbjct 2827544 AGGGTGCGTCCGTCTGCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGCAGGA 2827603
Query 41756 ACGCTCTCCTTG 41767
| || ||||||
Sbjct 2827604 ATTCTTTCCTTG 2827615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303924875600
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