Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq46 129 5e-25 seq73 96.9 3e-15 seq57 95.1 1e-14 >seq46 Length=1539107 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | ||||||||||| || |||||||| || Sbjct 988770 TACCGCCACGAAGACGCAGCACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAG 988829 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| || |||||| ||||| || || ||| |||| || || ||||| ||||| | Sbjct 988830 ACAGAGTACGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTG 988889 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| ||| || || || | |||| |||||| | ||||| Sbjct 988890 GGATGCCCTCCTTGTCCTGAATCTTACTCTTGACATTGTCGATGGTGTCAGATGACTCGA 988949 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || ||||| || ||||| || || || || ||||| Sbjct 988950 CCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 988998 >seq73 Length=165115 Score = 96.9 bits (106), Expect = 3e-15 Identities = 293/450 (65%), Gaps = 27/450 (6%) Strand=Plus/Plus Query 44864 GTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCGATATTTTA- 44922 |||||||||||| |||||||| | ||||| || || || ||| | || || | Sbjct 158110 GTCGCATTCGCCGCAGTCGAAGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGG 158169 Query 44923 --CATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGA 44980 || |||| | || |||||||||| || || || |||||| | || || | Sbjct 158170 CTCAAGAAACGC---GGTCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGC 158226 Query 44981 GACGAAGGTCTGCACACCAACTTTGCCTGCCT-CTACTATAATACGAGA------GTCGA 45033 ||||| || |||||||| |||| |||||||| || || | || | | | Sbjct 158227 GACGAGGGCATGCACACCGACTTCGCCTGCCTACTGCTCTCCCACCTCAAGCACCGCCCC 158286 Query 45034 TCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGAT 45093 ||||||| | || || | | ||| || ||| ||||| ||||||||| Sbjct 158287 TCAAAAGAAG----------CCATCCAGGCCATCATCGTCGAGGCCGTCGCCATCGAGCA 158336 Query 45094 GGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGAG 45153 ||| || | | || || || ||| | | |||| |||||||| || |||||| Sbjct 158337 GGAGTTCCTCACAGACGCCCTCCCCTGCGCCCTCTTGGGCATGAACGCCAACCTGATGAA 158396 Query 45154 AAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAG--TATCCCAAGATG 45211 ||||||| ||||| ||||||||||| || |||||| | || | | |||||| Sbjct 158397 GCAGTACATCGAGTTCGTCGCCGATCGCCTGCTCGTC--GCTATGGGCAACCCCAAGTAC 158454 Query 45212 TACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAt 45271 | | | || ||||||| || || || ||| | || || || | | ||||| || || Sbjct 158455 TTCAAGTCTCAGAACCCCTTTGACTTCATGGAGAACATCTCTCTCGCTGGCAAGACAAAC 158514 Query 45272 ttttttGAGAAACGCGTCGGCGAATACAAG 45301 || || ||||| || ||||| || ||| || Sbjct 158515 TTCTTCGAGAAGCGTGTCGGTGACTACCAG 158544 >seq57 Length=1510414 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||| || ||| | ||||| || ||| Sbjct 1446746 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCG 1446687 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 ||||| || || ||| |||||||||||||||| ||||| || ||||||||||||||| Sbjct 1446686 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCT 1446630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829707362652