Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq46 118 1e-21 >seq46 Length=1539107 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||||||||||| ||||| |||||||| | || || || |||| || Sbjct 988561 CACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTGAGAGCGTTCGTCCGTCTTC 988620 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||| || ||||| || | |||||| ||||| | || | | |||||||||| Sbjct 988621 CAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGGATACCCTCCTTGTCCTG 988680 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | ||||| ||||||||| || | |||||| ||||| Sbjct 988681 GATCTTGCTCTTCACATTGTCGATGGTGTCTGACGATTCCACTTCCAACGTGATAGTTTT 988740 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| || ||||| ||||| Sbjct 988741 GCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| |||||| || | || ||| || || || ||||| |||| |||||| || | Sbjct 988783 ACGCAGCACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACC 988842 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || || || |||||||||| || | || |||||| Sbjct 988843 ATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTT 988902 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | |||| | | | ||||| || || || |||| |||| Sbjct 988903 GTCC-TGAATCTTACTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCGAGAGTGA 988961 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| || || ||||| || ||||||||||| Sbjct 988962 TGGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 988998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816663648680