Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq46 125 6e-24 seq57 84.2 2e-11 >seq46 Length=1539107 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||||||||||||||||||||||| || || || |||| ||| Sbjct 988562 ACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTGAGAGCGTTCGTCCGTCTTCC 988621 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || |||||||| ||||| ||||||||||| || || | ||||||||||||| Sbjct 988622 AATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGGATACCCTCCTTGTCCTGG 988681 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||||| |||| || || || ||| Sbjct 988682 ATCTTGCTCTTCACATTGTCGATGGTGTCTGACGATTCCACTTCCAACGTGATAGTTTTG 988741 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| || ||||| ||||| Sbjct 988742 CCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||| ||||| ||||||||||| ||| ||| | || || Sbjct 988790 ACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCATCCTCA 988849 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| || || |||||||| || | |||||||||||| | Sbjct 988850 AGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGA 988909 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||| ||||| | || || |||||| Sbjct 988910 ATCTTACTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCGAGAGTGATGGTCTTG 988969 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| || ||||||||||| Sbjct 988970 CCAGTGAGAGTCTTGACGAAGATTTGCAT 988998 >seq57 Length=1510414 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| ||||| |||||| || |||| |||| || Sbjct 1446746 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCG 1446687 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || || |||||||| || | ||||| |||||||| || | ||||||||||| Sbjct 1446686 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTC 1446631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074569237751