Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 347 1e-90 seq73 244 9e-60 seq46 107 2e-18 seq57 100 3e-16 >seq2 Length=1003996 Score = 347 bits (384), Expect = 1e-90 Identities = 1211/1865 (65%), Gaps = 62/1865 (3%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||| |||||||||||||| | || || || Sbjct 557861 TGGTACGGAGGTAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCAGCGAAGTGCATGC 557802 Query 22203 ACGTCAATTTTCCATAAC-TCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCG 22261 || ||| || | | | ||||| | || || | |||| |||||| ||||||| Sbjct 557801 TGGT-AATCTTGCCCATCGTCGGCTCCTTCAAGTGGATGTTGAGTGACTGAGACTGATCG 557743 Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACG 22321 || || || || || || || ||||| | | | ||||| || || ||||| || Sbjct 557742 ATGAAGGCACCACGGTCAGCAGCCATCTGCAGAACAGTACGTTGTGAGATCTCCCACACT 557683 Query 22322 GTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCT-CTGGACGGACCCGTT 22380 |||||||| ||| | |||| || ||| | || || | | | ||||| || ||| Sbjct 557682 GTCTTGTAAAGTGCCTTGATGTCAGCCGGGA-CGTTTGGCACATTCTGGATAGAGCCGCC 557624 Query 22381 ATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTT 22440 | ||||| || || || | || |||||| |||| || || || || Sbjct 557623 CTCAGCAATGATGCGGTTCTTCATGTTGTCTGACCACAAGCCGAGATCGACCAGGTCCTT 557564 Query 22441 GACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGT 22499 || ||| |||| || || || |||||||| | ||||| | ||||| ||| |||| Sbjct 557563 GAGCAGCCAGGGGTTAACAACCTGGAACTCGCCAG-CAAGAACTCGGCGAGAGTAGATGT 557505 Query 22500 TGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCG 22559 |||||||| | || ||||| | |||||||| |||| ||||| | || || || || | Sbjct 557504 TGGATGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTTGAGGCTGTAG 557445 Query 22560 GCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGC- 22618 |||| || |||| ||| || ||||| | | ||||| | | || | | ||| ||| Sbjct 557444 GCATGGGAGCCAGCAGCAGTGAGTTGCGAACACCGTGTTGAGCGATATCAGCCTTCAGCG 557385 Query 22619 -ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACAC 22677 ||| |||||||||||| || | || || ||||| |||||| ||||| || | | Sbjct 557384 AATC--CCAGTCCCACAGGTCCGTAGGAGTGACATT---CCACATGTCGTACTGGAGGAT 557330 Query 22678 GCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCA---TATATCGCGGCAAG 22734 ||| | | || ||| | || || |||||||| ||| | | |||| || Sbjct 557329 GCCTTGTGAGACAGGTGAGCCCTGATATGTCTCGTACGGGCCAAGCTCTTTCGCC---AG 557273 Query 22735 TTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC 22794 | |||| || | || | | || |||||||| ||||| | |||| | Sbjct 557272 TGCGCACGAAGCTGTGAGAGCAGCATGGTAGATAGTCTCAAAGATCTGTATGTTGA---- 557217 Query 22795 GGCGGCGGCGACGCTT--------TCGTACGGCATACGCATCATCACGAACGCGTCCGCC 22846 || || |||| || | || | ||| | | ||| || || || Sbjct 557216 ----GCTGCCTTGCTTCAGGAGAGTCAAATGGTAGACGAAGTGCAAGGAAGGCATCGGCG 557161 Query 22847 ATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTT-TTGCCTCGGG 22905 | ||| || || || | |||||| ||||||| | | | || | ||| ||| || Sbjct 557160 AGACCTTGGACACCAAGACCGATGGGTCGGTGTCTGAAGTTG--CTCTTCTTGGCTTCTT 557103 Query 22906 CAA-AGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTA 22964 ||| ||| || | || ||||| | |||||||||| | |||||||| || | | Sbjct 557102 CAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAGTTGCGGGTCACAACTTGAGCGA 557043 Query 22965 TNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC---GATTGTACAACAAACTTGTTGACGG 23021 | |||||||| | || || || |||| || || || | | Sbjct 557042 CCTCGTGCAGACGACCGAAGTCGTATTCACCACGGGACTGGTCAACGAA--TGCTGGCAG 556985 Query 23022 CGATCGAG--GCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||| || || | ||||| || || ||||| || | |||||||| | || || Sbjct 556984 CGACAAAGAAGCCAAGTTGCAGACAGCGACCTCATCCGGAGCAGTGTACTCGATGATCTC 556925 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 || || | ||| | | || ||||| | || |||||||| || || ||||| Sbjct 556924 AGTGCACAAGTTGGAGCTCCGGATGGTGCCAAGGTTTTTCTGGTTGGACTTGCGGTTGCA 556865 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 | |||||||||||||||||| || ||||| || ||| ||| | ||||| || || Sbjct 556864 AGCATCCTTGTAGAGCATGTATGGGGTGCCGGTTTCGGTCTGAGCCTCGAGAATGGCGTA 556805 Query 23200 CCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGG 23257 ||| | | || || | | |||| || |||| ||||||| |||||| | | Sbjct 556804 CCAGAGCTTTTGTGCTTTGATG-GTCG-ACCTACCACGACCTTCTTGCTCGTATCTGGTG 556747 Query 23258 TACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACA 23316 |||| || || || || | ||||| ||| || || || || || | | | || || Sbjct 556746 TACAGAGCCTCGAACTCTTCGCCGTACACA-TCAGCTAGACCTGGGCACTCGTTTGGGCA 556688 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| || |||| | || || || || || ||| || | ||| || |||| | Sbjct 556687 CATCAGTGTCCAATCTTGGTTCTTCTCCACACGCTGCATGAACAAATCAGGCGTCCACAA 556628 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 |||||||||| || || ||||| ||||| || |||||| |||||| | | | Sbjct 556627 GCCGTAGAACAGGTCTCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAG 556568 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| || || | || || ||||| ||||||||||| |||||||| || ||||| | ||| Sbjct 556567 AAACTCGAAGATATCAGCGTGCCATGGCTCGAGGTACACGGCAAATGCACCCGGACGCTT 556508 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||| || ||||| || || || || ||||||||| | ||||| ||||| || | ||| Sbjct 556507 GTTGCCACCTTGATCAACATAGCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGAATGAG 556448 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 || ||||| | ||| | |||||| | || || | || || | | |||| | Sbjct 556447 GCCATTGGAGGTACCGTTTGTGCCCGCAATGTAGGAGCCAGTGGCACGGATGCAGTGAGC 556388 Query 23617 GTGGAAACCTATGCCTCC-GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGT 23675 || || ||| | || || || | ||| || ||||| || ||| || ||||| |||| Sbjct 556387 GTTGAGACCAACACCACCAGCACTCTTT-GAGATCATGGCACATGTCTTGAGAGTATCGT 556329 Query 23676 AGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTT 23735 ||||||| || ||||||||| || | ||| | ||| || || |||| ||| | | Sbjct 556328 AGATGCCATCAATGCTGTCCGACTTCATGTCGATGAGGAAGCAAGACGACAGTTGTGGGT 556269 Query 23736 TGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGT-AAAGTATCCATTCGACATT 23794 |||||| | || | ||||||||| || |||||| || || || | | | |||| Sbjct 556268 GGGGCGTGCCAGCTGCGAACAGTGTTGGTGAGGCGTGTGTGAAGGTCTTC-TGGGACAAG 556210 Query 23795 AGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGC 23854 || ||||| || |||||||| |||| ||| || ||||| || || | ||||| ||| Sbjct 556209 AGGTTGTAGGTCTCGATGGCCTTCTCAACGTCGTCACCGTGGATGCCAACAGCGACACGC 556150 Query 23855 ATCATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAA 23911 |||| ||||| |||||||||||| ||| | |||| || |||| ||| ||||| Sbjct 556149 ATCAACATGTGCTGAGGTCTCTCGGCCACCTTCTTGCCG---ATCTTGAGCAGGTATGAT 556093 Query 23912 CGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCC 23971 || | | || || || || || || | ||||| ||||| || || | || |||||| Sbjct 556092 CGCTCAAGTGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACGATGGCC 556033 Query 23972 GAATT 23976 || || Sbjct 556032 GAGTT 556028 >seq73 Length=165115 Score = 244 bits (270), Expect = 9e-60 Identities = 565/843 (67%), Gaps = 29/843 (3%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || || ||| | |||||||| || |||||||| || ||||||| |||||||| ||| Sbjct 157696 GAGATCTGGCAAATGTACAAGAAAGCAGAAGCTAGCTTCTGGACCGCAGAAGAAGTCGAC 157755 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATT 57683 || || | ||||| | ||| | || |||| || ||| | | || ||| Sbjct 157756 CTCTCCCAAGATCTACAACACTGGCACCACCGCCTCAACGACGACGAGCGGTACTTCATT 157815 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 ||||||| | || || |||||||| ||||| || || || |||||||| | |||| Sbjct 157816 TCACACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAG 157875 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | || || || || || || | || ||| | ||||| ||||| || || | Sbjct 157876 CGCTTCTCCGGCGAGGTCCAGGTCCCCGAAGCGCGTTGCTTCTACGGCTTCCAGATCATG 157935 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863 || |||||| | || || |||||||| ||||| |||||||| |||||| | | ||| | Sbjct 157936 ATGGAAAACATCCACTCCGAAATGTACTCGCTGCTCATCGACACGTACATCAGCGACCCC 157995 Query 57864 GACGAGAAACGTAGAC---TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAG 57920 | | |||| || | ||| |||| ||||| || || ||| ||| ||||||| Sbjct 157996 AA---GCAACGATCACACCTCTTCGACGCCATCGACACCATCCCCTGTATCCGCAAGAAG 158052 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTA 57977 || || ||| || || ||||| || || | | || ||||| || | || Sbjct 158053 GCCGACTGGGCACTCCGTTGGATCTC---CGACAAGCAATCGACCTTCGCGCAGCGCCTC 158109 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037 |||| |||||||| |||||||| || ||||| || ||| ||| ||| | || || ||| Sbjct 158110 GTCGCATTCGCCGCAGTCGAAGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGG 158169 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 | ||||||||||| |||||||||||||| || || ||||||| | || || |||||| Sbjct 158170 CTCAAGAAACGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGAC 158229 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACG 58157 ||||| | || || || || || |||||| || ||||| || |||| |||| | Sbjct 158230 GAGGGCATGCACACCGACTTCGCCTGCCTACTG--CTCTCCCA-CCTCAA-GCACCGCCC 158285 Query 58158 C----GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGT 58213 | || |||| || ||| ||| |||||| ||||| ||||| | ||||| | Sbjct 158286 CTCAAAAGAAGCCATCCAGGCCATCATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTCCT 158345 Query 58214 CACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACAT 58273 ||| || ||||| || ||| | | || |||||| | ||||| ||||||| Sbjct 158346 CACAGACGCCCTCCCCTGCGCCCTCTTGGGCATGAACGCCAACCTGATGAAGCAGTACAT 158405 Query 58274 TGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTA---CAACAC 58330 ||||| || ||||| | | |||||| || || | | | || ||| | Sbjct 158406 CGAGTTCGTCGCCGATCGCC---TGCTCGTCGCTATGGGCAACCCCAAGTACTTCAAGTC 158462 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 | || || ||||| || ||| | ||||| |||| |||||||||||||| ||||| Sbjct 158463 TCAGAACCCCTTTGACTTCATGGAGAACATCTCTCTCGCTGGCAAGACAAACTTCTTCGA 158522 Query 58391 AAA 58393 || Sbjct 158523 GAA 158525 >seq46 Length=1539107 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || ||||| |||| || || | || Sbjct 988998 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCT 988939 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 988938 GACACCATCGACAATGTCAAGAGTAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 988879 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || ||||| ||||| ||| | || || | ||| || || || ||| Sbjct 988878 CAACGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGTACTCTGTCTGACTACAAC 988819 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || ||||| || |||| || | || | ||||||| Sbjct 988818 ATCCAGAAAGAGTCTACTCTACACTTGGTGCTGCGTCTTCGTGGCGGTA 988770 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| ||||||||||| ||||| | || || ||| |||| Sbjct 988770 ATGCAGATCTTCGTCAAGACTCTCACAGGCAAAACTATCACGTTGGAAGTGGAATCGTCA 988711 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | || | |||| || | | ||||||||| || | || || ||| Sbjct 988710 GACACCATCGACAATGTGA---AGAGCAAGATCCAGGACAAGGAGGGTATCCCACCTGAC 988654 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATT 31367 || ||||| | || ||||| ||||| || ||||||||| | | || | | |||| Sbjct 988653 CAACAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGACGGACGAACGCTCTCA--GATT 988596 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 | |||||||| || || ||||| || |||| || | ||| | || ||| Sbjct 988595 ACAACATTCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGCCTGCGTGGTGGT 988543 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || |||||| | || || || | || |||| | || | ||||| Sbjct 989202 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATTGACAACGTCAAGAGC 989143 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||||||| | || || |||||||| ||||| || || |||||||| Sbjct 989142 AAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTCTCATCTTTGCTGGCAAG 989083 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | ||||| | || ||||||| || ||||| || || ||||| || ||||| Sbjct 989082 CAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAATCCACCCTTCAC 989023 Query 31397 CTGGTACTTAGACTGAGGGGCGGTA 31421 || || || | || | ||||||| Sbjct 989022 CTTGTCCTCCGTCTCCGTGGCGGTA 988998 >seq57 Length=1510414 Score = 100 bits (110), Expect = 3e-16 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345 |||||||| ||| | || ||||||||||||||||| || ||||| ||||| ||| | ||| Sbjct 1446631 GACAAGGAGGGCATCCCACCCGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAA 1446690 Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| | || | ||| |||||||| || || || ||||||||||| |||| ||| Sbjct 1446691 GACGGTCGCACCCTCTCCGACTATAACATCCAGAAGGAGTCGACTCTTCACTTGGTCCTT 1446750 Query 31406 AGACTGAGGGGCGGT----AGAAGCG 31427 | ||| | |||||| ||||||| Sbjct 1446751 CGTCTGCGTGGCGGTGGCAAGAAGCG 1446776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765670057520