Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq73 105 7e-18 seq46 102 8e-17 >seq73 Length=165115 Score = 105 bits (116), Expect = 7e-18 Identities = 241/358 (67%), Gaps = 5/358 (1%) Strand=Plus/Plus Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559 |||||||||||||| || ||||||| | || || |||||||| || |||||||| ||| Sbjct 158188 ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCATGCACACCGAC 158247 Query 50560 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTG 50619 || || || | ||| | | | | | | || | ||| | ||| | || | Sbjct 158248 TTCGCCTGCCT--ACTGCTCTCC-CACCTCAAGCACCGCCCCTCAAAAGAAGCCATCCAG 158304 Query 50620 GACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTG 50679 | ||| || || ||||||| |||||| | ||||| |||| ||||| | ||| Sbjct 158305 GCCATCATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACAGACGCCCTCCCCTGC 158364 Query 50680 GCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGA 50739 || | |||||||||||||| || ||||| ||||||| ||||| || || || | Sbjct 158365 GCCCTCTTGGGCATGAACGCCAACCTGATGAAGCAGTACATCGAGTTCGTCGCCGATCGC 158424 Query 50740 TTG-TTGTTGCAGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTAT 50798 || | || || |||| | || || |||| || | | ||||||||| || || Sbjct 158425 CTGCTCGTCGC-TATGGGCAACCCCAAGTACTTCAAGTCTCAGAACCCCTTTGACTTCAT 158483 Query 50799 GAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 | | ||||| || | | ||||| |||||||| ||||| | ||||| || || ||| Sbjct 158484 GGAGAACATCTCTCTCGCTGGCAAGACAAACTTCTTCGAGAAGCGTGTCGGTGACTAC 158541 >seq46 Length=1539107 Score = 102 bits (112), Expect = 8e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || ||||| || || |||||||| ||||||| |||| |||||||| || Sbjct 989024 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCGAGCTGC 989083 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| |||| ||||||||||| || ||||| |||||||| ||||| ||| || Sbjct 989084 TTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTG 989143 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | ||||||| || || || |||| || | ||||||||||| Sbjct 989144 CTCTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 989202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013569763920