Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq73 244 2e-59 seq2 154 2e-32 >seq73 Length=165115 Score = 244 bits (270), Expect = 2e-59 Identities = 580/870 (67%), Gaps = 25/870 (3%) Strand=Plus/Plus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || ||| ||| ||| ||||| || ||| |||||||||| || || | || ||| Sbjct 157674 CCTCTTCCCCCTCAAGTACCATGAGATCTGGCAAATGTACAAGAAAGCAGAAGCTAGCTT 157733 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||| | ||||| ||||| || ||| | || || | | ||| | || | | Sbjct 157734 CTGGACCGCAGAAGAAGTCGACCTCTCCCAAGATCTACAACACTGGCACCACCGCCTCAA 157793 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || ||||| | || || || ||| | | |||||||| |||| ||||| || || Sbjct 157794 CGACGACGAGCGGTACTTCATTTCACACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCAT 157853 Query 125174 CGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG 125231 ||||||||| || || | || ||||| ||| | ||| | || || | | Sbjct 157854 CGTCAACGAGAACCTCCTCGAGCGCTTCTCCGGCGAGGT--CCAGGTCCCCGAAGCGCGT 157911 Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291 ||||| ||||| ||||| |||||||| || ||| | ||||| ||||||||||| || Sbjct 157912 TGCTTCTACGGCTTCCAGATCATGATGGAAAACATCCACTCCGAAATGTACTCGCTGCTC 157971 Query 125292 ATTGACATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGAC 125348 || |||| |||||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 157972 ATCGACACGTACATCAGCGACCCCAAGCAACGATCACAC---CTCTTCGACGCCATCGAC 158028 Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG 125408 || | || | ||| || || ||||| | |||| | || |||||| ||| | | Sbjct 158029 ACCATCCCCTGTATCCGCAAGAAGGCCGACTGGGCACTCCGTTGGATCTCCGACAAGCAA 158088 Query 125409 TCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGT 125468 || | | ||| | | || || ||||||||||| || || ||||||||||| || || Sbjct 158089 TCGACCTTCGCGCAGCGCCTCGTCGCATTCGCCGCAGTCGAAGGCATCTTCTTCTCCGGC 158148 Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528 || ||| ||||||| ||||||||||| ||||| || |||||||| || || | Sbjct 158149 TCCTTCGCGTCCATCTTCTGGCTCAAGAAACGCGGTCTGATGCCCGGCCTCACCTTCTCC 158208 Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG-TTTCG 125587 |||||| | || || || ||||||||| | ||| ||||| ||| |||||| | || Sbjct 158209 AACGAGCTCATCTCCCGCGACGAGGGCATGCACACCGACTTCGCCTGCCTACTGCTCTCC 158268 Query 125588 CAACT--ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACC 125645 || || | | || ||| || | ||| || ||| ||||| | | | Sbjct 158269 CACCTCAAGCACCGCCCC----TCAAAAGAAGCCAT--CCAGGCCATCATCGT------C 158316 Query 125646 GATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGC 125705 || ||||| || || || ||||| || || || |||| || | | | | ||| Sbjct 158317 GAGGCCGTCGCCATCGAGCAGGAGTTCCTCACAGACGCCCTCCCCTGCGCCCTCTTGGGC 158376 Query 125706 ATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765 |||||| ||| || ||| ||||||| ||||| || || ||||| || || || Sbjct 158377 ATGAACGCCAACCTGATGAAGCAGTACATCGAGTTCGTCGCCGATCGCCTGCTCGTCGCT 158436 Query 125766 TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825 || || |||| | ||| | |||| |||||||| |||||| | ||| || Sbjct 158437 ATGGGCAACCCCAAGTACTTCAAGTCTCAGAACCCCTTTGACTTCATGGAGAACATCTCT 158496 Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 || | || ||||| ||||| ||||||||| Sbjct 158497 CTCGCTGGCAAGACAAACTTCTTCGAGAAG 158526 >seq2 Length=1003996 Score = 154 bits (170), Expect = 2e-32 Identities = 359/534 (67%), Gaps = 12/534 (2%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 |||||||| | | ||| |||||| | || ||||| ||| | | ||| || || | || Sbjct 556427 ACAAACGGTACCTCCAATGGCCTCATTCCCATGCTGAGAGTCTTCAACAACACTG-CTCG 556485 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 || ||| || || ||||| || || || || || | ||||| ||| | || || || Sbjct 556486 CTATGTTGATCAAGGTGGCAACAAGCGTCCGGGTGCATTTGCCGTGTACCTCGAGCCATG 556545 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| || | || || ||| || | | ||||| ||| ||| ||||||| || Sbjct 556546 GCACGCTGATATCTTCGAGTTTCTCAACCTACGCAAGAACCACGGCAAGGAAGAGGTCCG 556605 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAA 97042 || | ||| |||| || | | ||| ||| |||||||||||| |||| || || Sbjct 556606 CGCTCGAGACCTGTTCTACGGCTTGTGGACGCCTGATTTGTTCATGCAGCGTGTGGAGAA 556665 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102 || | | |||| || |||||||| || || || ||||| | ||| | Sbjct 556666 GAACCAAG---ATTGGACACTGATGTGCCCAAACGAGTGCCCAGGTCTAGCTGATGTGTA 556722 Query 97103 GGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC--GATACGTGAGA 97160 ||||||||||| ||||| |||||| ||||||||||| || | | || || || Sbjct 556723 CGGCGAAGAGTTCGAGGCTCTGTACACCAGATACGAGCAAGAAGGTCGTGGTAGGT-CGA 556781 Query 97161 CGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220 | | || | |||| | | || ||| | ||||| | ||||||| || || || || Sbjct 556782 CCA-TCAAAGCACAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACCGGCACC 556840 Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280 || ||||| |||||||||||| | || ||||| |||||| || | |||||| Sbjct 556841 CCATACATGCTCTACAAGGATGCTTGCAACCGCAAGTCCAACCAGAAAAACCTTGGCACC 556900 Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||| | ||||||| ||||||| || || | |||||| | ||||||| ||| Sbjct 556901 ATCCGGAGCTCCAACTTGTGCACTGAGATCATCGAGTACACTGCTCCGGATGAG 556954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057986515560