Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq46 100 7e-16 >seq46 Length=1539107 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| ||||| |||||||| || || |||||||| ||||| | ||| || || || || Sbjct 988796 TGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCATCCTCAAGCTGC 988855 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || || || || || | || || || || || || || || || ||||||||||| Sbjct 988856 TTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTA 988915 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || ||||| || | ||| || | || ||||| || || || ||||| ||||| Sbjct 988916 CTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTG 988975 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| Sbjct 988976 AGAGTCTTGACGAAGATTTGCAT 988998 Score = 89.7 bits (98), Expect = 1e-12 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| | || | ||| ||||| || || || ||| Sbjct 989030 GTGGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCGAGCTGCTTGCCA 989089 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 ||||| || || | || || |||||||| || ||||| || ||||||||| ||||| || Sbjct 989090 GCAAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATC-TTGCTCTT 989148 Query 104482 TACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | ||| || | ||| || ||||| || || || ||||| || |||| || Sbjct 989149 GACGTTGTCAATGGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAACTG 989207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396467449748