Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq51 100 2e-16 >seq51 Length=425537 Score = 100 bits (110), Expect = 2e-16 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 25740 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG--TCCGTGTACTCTGCTCCGAAA 25797 |||||| || ||| |||| |||||| | | | | | | || ||| ||||| |||||| Sbjct 275777 CTGATCGACGCCCTTCCCGCTGTAGTC-GTCTTGAGGCGTGCG-GTATTCTGCGCCGAAA 275834 Query 25798 TACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCC 25857 | || ||| ||||| ||||| || || || ||||| || ||||| | | |||||| Sbjct 275835 TGCCGCCATTGGAAGCCGTAGACGGGGCCGAGGTCGCCTTCTTCGCGATCGGTGAAGCCC 275894 Query 25858 CTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 25917 ||| || | ||| | | ||| || ||| ||||||||||||| | || |||||| Sbjct 275895 AGCTTGTCGAGGAAGGCGCGGGAGCCGTTGCCGTCCCAGATCTTGATGCCGGCTTCGGAG 275954 Query 25918 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 || ||||||| ||||| || ||||||||| || || || | |||||||| Sbjct 275955 AGGGGTTTGGAGGAGGTGGATCCGGCGACGAACCAGAGGAGTTCGGTGGTGACGGC 276010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137056949063