Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq64 127 3e-25 seq41 118 2e-22 >seq64 Length=278981 Score = 127 bits (140), Expect = 3e-25 Identities = 121/152 (80%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 16481 AAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTC 16540 |||||||||||||||||||| |||||||||||||| ||||||||| |||| | || || Sbjct 238980 AAGCCAGCTATCCGTCGTCTCGCTCGTCGTGGTGGCGTCAAGCGTATCTCAGCTATGATC 239039 Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTT 16599 || || || | ||||| |||| | || ||| |||||| || |||| |||| ||| || | Sbjct 239040 TACGAGGAAACTCGTGGTGTTCTCAA-ATCATTCCTCGAGTCCGTCATCCGTGACGCAGT 239098 Query 16600 CCACTATACCGAGCACGCTAAACGTAAGACTG 16631 | ||| ||||||||||| || || |||| || Sbjct 239099 CACCTACACCGAGCACGCCAAGCGCAAGAGTG 239130 >seq41 Length=800738 Score = 118 bits (130), Expect = 2e-22 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 16481 AAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTC 16540 ||||||||||| |||||||| || ||||||||||| ||||||||| |||| | || || Sbjct 155675 AAGCCAGCTATTCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCGGCCATGATC 155734 Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || ||||||| |||| ||| | |||| ||||||| | | || |||| |||||| || Sbjct 155735 TACGAAGAGACCCGTGGTGTCCTCAAGAGCTTCCTCGAATCAGTCATCCGCGATGCTGTC 155794 Query 16601 CACTATACCGAGCACGCTAA 16620 ||| ||||| |||||||| Sbjct 155795 ACCTACACCGAACACGCTAA 155814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075080225783