Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq46 86.0 6e-12 seq73 82.4 7e-11 >seq46 Length=1539107 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| || | ||||| |||| | || ||| Sbjct 988998 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCT 988939 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| || || || || ||||| || Sbjct 988938 GACACCATCGACAATGTCAAGAGTAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 988879 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || |||||| || || || |||| | | | | ||||| ||| Sbjct 988878 CAACGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGTACTCTGTCTGACTACAAC 988819 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| |||||| | || |||| ||| | ||| | || || Sbjct 988818 ATCCAGAAAGAGTCTACTCTACACTTGGTGCTGCGTCTTCGTGGCGG 988772 >seq73 Length=165115 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| | ||||| ||||| | Sbjct 158544 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTTGTCTTGCCAGCGAGAGAGATGTTCTC 158485 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || || || || || || ||||| | |||| || ||||| ||| | ||| Sbjct 158484 CATGAAGTCAAAGGGGTTCTGAGACTTGAAGTACTTGGGGTTGCCCATAGCGACGAGCAG 158425 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT--GGATTGCGAATTCATGCCCAACATA 119819 ||||| || || ||||||||||| | ||| || | ||| ||||||||||| | Sbjct 158424 GCGATCGGCGACGAACTCGATGTACTGCTTCATCAGGTTGGCG--TTCATGCCCAAGAGG 158367 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTAC 119872 ||| || | || | || | ||| |||| || ||| |||| || || || Sbjct 158366 GCGCAGGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGGCGACGGCCTCGAC 158314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661616190320