Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 273 6e-68 >seq2 Length=1003996 Score = 273 bits (302), Expect = 6e-68 Identities = 1102/1720 (64%), Gaps = 28/1720 (2%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || ||||| ||||| |||||||| ||| |||| ||||| | || ||||| || Sbjct 556133 CCTCAGCACATGTTGATGCGTGTCGCTGTTGGCATCCACGGTGACGACGTTGAGAAGGCC 556192 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCTCGTGTA--TTCACGCACGCCACGCCAACAATGT 363571 || || || || || || | || | | | ||||| |||||| | |||||| ||| Sbjct 556193 ATCGAGACCTACAACCTCTT--GTCCCAGAAGACCTTCACACACGCCTCACCAACACTGT 556250 Query 363572 ACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACG 363631 | ||||| || | | ||||| |||| |||||||| || | | |||||| | Sbjct 556251 TCGCAGCTGGCACGCCCCACCCACAACTGTCGTCTTGCTTCCTCATCGACATGAAGTCGG 556310 Query 363632 ATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAG 363691 | ||| || || |||| || || || |||| ||||| | || || |||| ||| | Sbjct 556311 ACAGCATTGATGGCATCTACGATACTCTCAAGACATGTGCCATGATCTCAAAGAGTGCTG 556370 Query 363692 GCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCAC 363749 | || ||||| | | || || || | ||||| || | | |||||| ||||| Sbjct 556371 GTGGTGTTGGTCTCAACGCTC-ACTGCATCCGTGCCACTGG-CTCCTACATTGCGGGCAC 556428 Query 363750 AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTA 363809 | || ||| ||||| || |||||||||| | || || |||| ||||| | || Sbjct 556429 AAACGGTACCTCCAATGGCCTCATTCCCATGCTGAGAGTCTTCAACAACACTGCTCGCTA 556488 Query 363810 CGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCA 363869 || || || ||||| ||||| || || ||||| |||| |||||||| || Sbjct 556489 TGTTGATCAAGGTGGCAACAAGCGTCCGGGTGCATTTGCCGTGTACCTCGAGCCATGGCA 556548 Query 363870 TGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGAGGAATTGCG 363926 || ||||| || |||||||| | || || || ||| |||| || |||||| | || Sbjct 556549 CGCTGATATCTTCGAGTTTCTCAACCTACGCAAGAACCACGGCAAGGAAGAGG---TCCG 556605 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || || || |||||||| | | ||| |||| || ||| |||| |||||| Sbjct 556606 CGCTCGAGACCTGTTCTACGGCTTGTGGACGCCTGATTTGTTCATGCAGCGTGTGGAGAA 556665 Query 363987 -AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 | |||| |||| |||| | |||||| |||| || |||||||| | ||||| | | Sbjct 556666 GAACCAAGA-TTGGACACTGATGTGCCCAAACGAGTGCCCAGGTCTAGCTGATGTGTACG 556724 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | || || | | ||||| ||| | || || || || | | | ||| | Sbjct 556725 GCGAAGAGTTCGAGGCTCTGTACACCAGATACGAGCAAGAAGGTCGTGGTAGGTCGACCA 556784 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | ||||| ||||| |||| ||||| | || | |||| || || || || || | Sbjct 556785 TCAAAGCACAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACCGGCACCCCAT 556844 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 | ||| | ||||| ||| | ||||||||||||||||||||| | ||||||| || || | Sbjct 556845 ACATGCTCTACAAGGATGCTTGCAACCGCAAGTCCAACCAGAAAAACCTTGGCACCATCC 556904 Query 364226 AGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285 | |||| | || || ||||| || || ||||| ||||| || ||| || || | Sbjct 556905 GGAGCTCCAACTTGTGCACTGAGATCATCGAGTACACTGCTCCGGATGAGGTCGCTGTCT 556964 Query 364286 GTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA------TGGTACTTTTGACC 364339 | ||| | || || | |||| || || || || | | |||| | ||| Sbjct 556965 GCAACTTGGCTTCTTTGTCGCTGCCAGCATTCGTTGACCAGTCCCGTGGTGAATACGACT 557024 Query 364340 ACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACA 364399 | | ||| | || || | | || || |||| | ||||| | ||||||| Sbjct 557025 TCGGTCGTCTGCACGAGGTCGCTCAAGTTGTGACCCGCAACTTGAACAAGATCATCGACA 557084 Query 364400 AGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTC 364459 || || || || || |||||| || || | | || || || || |||| Sbjct 557085 TCAACTACTACCCTGTTGAAGAAGCCAAGAAGAGCAACTTCAGACACCGACCCATCGGTC 557144 Query 364460 TTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTG 364519 ||||||| || || ||||| || | || | || | ||||||| || |||| Sbjct 557145 TTGGTGTCCAAGGTCTCGCCGATGCCTTCCTTGCACTTCGTCTACCATTTGACTCTCCTG 557204 Query 364520 ACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTT 364579 | || | || || | |||||||||| || || || ||| || | || |||| Sbjct 557205 AAGCAAGGCAGCTCAACATACAGATCTTTGAGACTATCTACCATGCTGCTCTCACAGCTT 557264 Query 364580 CGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGC 364639 |||| | |||| ||| || |||| || ||| |||| || ||| | || | Sbjct 557265 CGTGCGCACTGGCGAAAGAGCTTGGCCCGTACGAGACATATCAGGGCTCACCTGTCTCAC 557324 Query 364640 AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATA 364699 | || | |||||| || | ||||||||||| || | | || ||| |||||||| Sbjct 557325 AAGGCATCCTCCAGTACGACATGTGGAATGTCACTCCTACGGACCTGTGGGACTGGGATT 557384 Query 364700 CGCT--ACGTTCCAA-CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 |||| | | | | || | | || ||| ||||||||| || | || |||| Sbjct 557385 CGCTGAAGGCTGATATCGCTCAA---CACGGTGTTCGCAACTCACTGCTGCTGGCTCCCA 557441 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||| || || || || | |||||| | || ||||| ||||||||||| || | ||| Sbjct 557442 TGCCTACAGCCTCAACATCCCAGATCTTGGGTAACAATGAGTGCTTCGAGCCTTACACAT 557501 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| | || || ||||| |||||| | || || || | ||| ||||| | || Sbjct 557502 CCAACATCTACTCTCGCCGAGTTCTTGCTGGCGAGTTCCAGGTTGTTAACCCCTGGCTGC 557561 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936 ||||||| || ||| | ||| ||||| |||| |||||||||| ||||| || | Sbjct 557562 TCAAGGACCTGGTCGATCTCGGCTTGTGGTCAGACAACATGAAGAACCGCATCATTGCTG 557621 Query 364937 CTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996 || ||| | ||||| | ||| | || | || | ||| | ||||||| | Sbjct 557622 AGGGCGGCTCTATCCAGAATGTGCCAAACGTCCCGGCTGACATCAAGGCACTTTACAAGA 557681 Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056 | || ||||| || || || ||| | | | ||||| || || || ||||| || | Sbjct 557682 CAGTGTGGGAGATCTCACAACGTACTGTTCTGCAGATGGCTGCTGACCGTGGTGCCTTCA 557741 Query 365057 TCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACAT 365116 || |||| ||||| | ||| | | ||| |||| || | |||| |||| Sbjct 557742 TCGATCAGTCTCAGTCACTCAACATCCACTTGAAGGAGCCGACGATGGGCAAGATTACCA 557801 Query 365117 CCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| ||| || ||||| ||||| ||||| || Sbjct 557802 GCATGCACTTCGCTGGCTGGAAGATGGGTCTCAAGACTGG 557841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351412402442