Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq46 118 9e-22 seq57 84.2 2e-11 >seq46 Length=1539107 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || || ||||||| || || || | | Sbjct 988998 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCT 988939 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| || |||||||| || Sbjct 988938 GACACCATCGACAATGTCAAGAGTAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 988879 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | |||||| || || | || || |||||| Sbjct 988878 CAACGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGTACTCTGTCTGACTACAAC 988819 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| || || |||| || || |||| | || || ||| Sbjct 988818 ATCCAGAAAGAGTCTACTCTACACTTGGTGCTGCGTCTTCGTGGCGGT 988771 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || ||||| |||| | ||||||||| | | Sbjct 988770 ATGCAGATCTTCGTCAAGACTCTCACAGGCAAAACTATCACGTTGGAAGTGGAATCGTCA 988711 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || || |||||||||||||| ||||| || ||| Sbjct 988710 GACACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAA 988651 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| || || || || || || |||| ||||||||| Sbjct 988650 CAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGACGGACGAACGCTCTCAGATTACAAC 988591 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 988590 ATTCAGAAGGA 988580 >seq57 Length=1510414 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| || |||||||| || || ||||| || || |||||||| ||| | || Sbjct 1446630 AGACAAGGAGGGCATCCCACCCGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGA 1446689 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 || |||||| ||||||| || ||||| || || || || || | || || || | Sbjct 1446690 AGACGGTCGCACCCTCTCCGACTATAACATCCAGAAGGAGTCGACTCTTCACTTGGTCCT 1446749 Query 22431 GCGATTGCGCGGAGGT 22446 || |||| || ||| Sbjct 1446750 TCGTCTGCGTGGCGGT 1446765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727329878015