Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq46 143 6e-29 seq48 105 2e-17 >seq46 Length=1539107 Score = 143 bits (158), Expect = 6e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || | || | ||||| || || || || || || || Sbjct 988541 TGACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCT 988600 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | |||||| ||||||||||| ||||| || || |||||||||| |||||||| | | Sbjct 988601 GAGAGCGTTCGTCCGTCTTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGT 988660 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || || |||||||| || ||| ||||| || || || | || |||||| Sbjct 988661 GGGATACCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCTGACGATTC 988719 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||| || || || || |||||||||||||| |||||||| Sbjct 988720 CACTTCCAACGTGATAGTTTTGCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || || || || || || | || || || |||||| Sbjct 988808 TCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCATCCTCAAGCTGCTTGCCGGCGAAG 988867 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| || || || |||||| || || || ||||| || || || || || Sbjct 988868 ATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTACTCTTGACATTG 988927 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || || |||||||||||| Sbjct 988928 TCGATGGTGTCAGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACG 988987 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 988988 AAGATTTGCAT 988998 >seq48 Length=500340 Score = 105 bits (116), Expect = 2e-17 Identities = 137/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 288279 GCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGC 288338 |||| | || ||||| |||||||| | || ||||| || ||||| | ||| || || || Sbjct 102265 GCTTACCTTCTGGATGTTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGC 102324 Query 288339 GAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCA 288397 ||||||||| || || || | |||||| ||||| || || ||||| || ||| || | Sbjct 102325 GAAGATCAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTT-GCTCTTGA 102383 Query 288398 CGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 | || || || | || || || || ||||| ||||| ||||| || || || |||| Sbjct 102384 CATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCT 102443 Query 288458 TGACGAA 288464 ||||||| Sbjct 102444 TGACGAA 102450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652420023818